Query= MSMg01no347_f06.b1 MSMg01no347_f06.b1 CHROMAT_FILE:
MSMg01no347_f06.b1 PHD_FILE: MSMg01no347_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:16 2005
(290 letters)
>mm_chr12_8386599_8387287
Length = 689
Score = 536 bits (277), Expect = e-157
Identities = 284/287 (98%), Gaps = 3/287 (1%)
Strand = Plus / Plus
Query: 5 gaattccttacccgaaggtgagctcacagctggcctaaccactatgccaggcgtgcttct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttacccgaaggtgagctcacagctggcctaaccactatgccaggcgtgcttct 264
Query: 65 gtacacaacgacactagccttgcccaggctcctggaggtacggcctgtgctcctgctgtt 124
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtacacaacgac--tagccttgcccaggctcctggaggtacggcctgtgctcctgctgtt 322
Query: 125 tcctggctctgcccacacacccctacccagagtctatgctgtgtgtggaggtgaggaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcctggctctgcccacacacccctacccagagtctatgctgtgtgtggaggtgaggaagg 382
Query: 185 gaggcagagatgaggaaatcctaagaccaagttcaaggctcaagagagtggagcaggcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaggcagagatgaggaaatcctaagaccaagttcaaggctcaagagagtggagcaggcaa 442
Query: 245 acttaa-tcagcagggaccagagctgagagctaactaattatagggt 290
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acttaaatcagcagggaccagagctgagagctaactaattatagggt 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no347_f06.g1 MSMg01no347_f06.g1 CHROMAT_FILE:
MSMg01no347_f06.g1 PHD_FILE: MSMg01no347_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:16 2005
(453 letters)
>mm_chr12_8577664_8578516
Length = 853
Score = 542 bits (280), Expect = e-158
Identities = 298/304 (98%), Gaps = 2/304 (0%)
Strand = Plus / Minus
Query: 151 accccaccaccctcacccccacccctggcttcactagtccttatgtctgcctgtagctgt 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 accccaccaccctcacccccacccctggcttcactagtccttatgtctgcctgtagctgt 794
Query: 211 ctccattttgcttggacttcattgtgtttcttagatgtctcattaatggttttcaccatt 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ctccattttgcttggacttcattgtgtttcttagatgtctcattaatggttttcaccatt 734
Query: 271 ttggggaaatctgctgccattatttcctcgagcaccccttctatctccttgccctcctcc 330
|| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||
Sbjct: 733 tttgggaaatctgctgccattatttcctccagcaccccttatatccccttgccctcctcc 674
Query: 331 ttctgcacattc-cactgtgtgcactgtgatcatcctgctgtgtgcactatgatgcttta 389
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttctgcaca-tctcactgtgtgcactgtgatcatcctgctgtgtgcactatgatgcttta 615
Query: 390 ctgatactacctttctgctatcacactgttctcatccctgcccctaattctccgggtttt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctgatactacctttctgctatcacactgttctcatccctgcccctaattctccgggtttt 555
Query: 450 gttt 453
||||
Sbjct: 554 gttt 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
