NAACATAACTTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCATGATATCCTTAGACAATGGATAGATCTGGAGCATA
TGATCCTAAGTGAAGTAACCCAGTCACAAAAGAACACACATGATATGCAC
TCACTGATAAGTGGATATTAGCCCAAACGCTCAGAATACCCAAGATACAA
TTTGCAAAACACATGAAACTCAAGAAGGAAGTCCAAAATTTGGACACTTT
GATCCTTCTTATAAGGGGGAACAAAATACCTATGGATGGAGTTGCAGAGA
CAAAGTTCGGAGCAGAGACTGAAGGAACGACCATCCAGAGACTGCCCCAC
CTGGGGATCCATTCCATAAACAACCACCAAACCCAGACACTACTGCAGAT
GCCAACAAGAGCTTGCTGTCAGGAGACTGATAAAGCTGTCTCCTGAGAGG
CTCTACCAGCTCCTGACAAATGAGAAGTGGATCCATTAGACAGAGCACAT
TGTCCCCACTGAAGGAGCTAGAGAAAGTACCCAAGGAGCAGAAGAGGTTT
GCAGCCCCCTAGGAGAAACAACAATGTGAACTAGGCAGTAACCCTTGAAC
TCCCTGGGACTAAACTACCCATCAAAGAAAACACACCGAGTGACTCAGGG
TTCTAGCTGCTTATGTAACACAAGATGGCCTAATTGTCCTCCAATGTGAA
GAAAAACCCTTGGGCCTGGGAAAATTCTATGCG

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTGTAGCATCAGCTGTTCTCAAAC
AAAGGCAGCTTCTTGTCTTAGACTTCTGATTGCTGGAATAGCAGACGTAA
AGCCACAGATTTAGCAGGAAAGACAGGGTTTTTAAGGAAAAAAGTTTGTA
TAGTAAGACTCTGAGAAATAAGGAGGACTTCACATATGTAGAGTGCCTGC
TCGTTATTAGCTCAGGATTACAAGGTAAGCTTGACCTAGATGTTAGACAT
TCTTACAAGATGAATTTCCTTGCTTTAAGAGTGCATTTACTTATTTGTGC
GTGAATGTGAGCACACCAAGACTTGGATAGGGAAGTCAGAGCACAGTTTC
TGTGTGGATCTTGGGGCTTGATGAACTCAGGCCAACAGCTTGGCAGCAGG
CACCTTTTCCACTGAGGCGTCCTGCCAGTCAGTCATTCCTTGCCCTTTCA
AACCCCTTCCTGGAATCATGAAGAAACCAAACCAGTTAGTTAAGAGACAG
AAGCTTAAAGTTGTGTACAAATAATCTTAAACACAGGCCACATATGAACA
GTTTTAAAATTACATTGGCTTGTATGTAAATATGGAAAGATTCCTCATAA
TATACTTCGCTGTTACCAAAATTTGTCCTGAGGAAAGATCCAAAAAAAGC
TGGTGTTTAATTTTTCCTACCCACCGCACTAAAAATGGGGGGCTTGGGGG
CCCTCTATTCTCGGGGCTCCCCCCG

Query= MSMg01no347_g09.g1 MSMg01no347_g09.g1 CHROMAT_FILE:
MSMg01no347_g09.g1 PHD_FILE: MSMg01no347_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:22 2005
         (506 letters)



>mm_chr12_40946839_40947744
          Length = 906

 Score =  963 bits (498), Expect = 0.0
 Identities = 504/506 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgtagcatcagctgttctcaaacaaaggcagcttcttgtcttagacttctgattgctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 actgtagcatcagctgttctcaaacaaaggcagcttcttgtcttagacttctgattgctg 468

                                                                       
Query: 61  gaatagcagacgtaaagccacagatttagcaggaaagacagggtttttaaggaaaaaagt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaatagcagacgtaaagccacagatttagcaggaaagacagggtttttaaggaaaaaagt 408

                                                                       
Query: 121 ttgtatagtaagactctgagaaataaggaggacttcacatatgtagagtgcctgctcgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttgtatagtaagactctgagaaataaggaggacttcacatatgtagagtgcctgctcgtt 348

                                                                       
Query: 181 attagctcaggattacaaggtaagcttgacctagatgttagacattcttacaagatgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 347 attagctcaggattacaaggtaagcttgacctagatgttagacattcttacgagatgaat 288

                                                                       
Query: 241 ttccttgctttaagagtgcatttacttatttgtgcgtgaatgtgagcacaccaagacttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 287 ttccttgctttaagagtgcatttacttatttgtgcgtgaatgtgagcacaccaagacatg 228

                                                                       
Query: 301 gatagggaagtcagagcacagtttctgtgtggatcttggggcttgatgaactcaggccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gatagggaagtcagagcacagtttctgtgtggatcttggggcttgatgaactcaggccaa 168

                                                                       
Query: 361 cagcttggcagcaggcaccttttccactgaggcgtcctgccagtcagtcattccttgccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 cagcttggcagcaggcaccttttccactgaggcgtcctgccagtcagtcattccttgccc 108

                                                                       
Query: 421 tttcaaaccccttcctggaatcatgaagaaaccaaaccagttagttaagagacagaagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tttcaaaccccttcctggaatcatgaagaaaccaaaccagttagttaagagacagaagct 48

                                     
Query: 481 taaagttgtgtacaaataatcttaaa 506
           ||||||||||||||||||||||||||
Sbjct: 47  taaagttgtgtacaaataatcttaaa 22


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)