Query= MSMg01no347_g18.b1 MSMg01no347_g18.b1 CHROMAT_FILE:
MSMg01no347_g18.b1 PHD_FILE: MSMg01no347_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:23 2005
(363 letters)
>mm_chr12_54134625_54135387
Length = 763
Score = 663 bits (343), Expect = 0.0
Identities = 355/359 (98%)
Strand = Plus / Minus
Query: 5 gaattcaaatgattccctttggctaagtagacccaagatgagtccattctgagctgacaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaattcaaatgattccctttggctaagtagacccaagatgagtccattctgagctgacaa 504
Query: 65 gaaataatggttctttaaaaagtatcagtcagcctatatttggcattacatttatatatt 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 503 gaaataatggttctttaaaaagtaacagtcagcctatatttggcattacatttatatatt 444
Query: 125 acgtttatatagtctatggcctcagaggtgcttcacgtgagaggcagactaaggctgtta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acgtttatatagtctatggcctcagaggtgcttcacgtgagaggcagactaaggctgtta 384
Query: 185 acccttagtaagtctttttccaggaagcatctctattggaaagagatattcaagagggtg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 acccttagtaagtctttttccaggaagcatctctattggaaagagatattcaagagggcg 324
Query: 245 attaaagtgtgtgatttcctgtagcagttctcactgtaatacactcatctcctcaaacta 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 323 attaaagtgtgtgatttcctgtagcagttctcactggaatacactcatctcctcaaacta 264
Query: 305 aaatctcttggtaggttcccaaggctgaacacaaccgttggtcagtgatgttggacact 363
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 263 aaatctcttggtaggttcccaaggctgaacacaaccgttggccagtgatgttggacact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_g18.g1 MSMg01no347_g18.g1 CHROMAT_FILE:
MSMg01no347_g18.g1 PHD_FILE: MSMg01no347_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:23 2005
(406 letters)
>mm_chr12_53947556_53948362
Length = 807
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 1 aacccgagtcctccagagacaggcagtgagagtgctctcaacaaccgagccctatttccg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacccaagtcctccagagacaggcagtgagagtgctctcaacaaccgagccctatttccg 260
Query: 61 gctaaactttttaggttttttttttttt-aaagttatacataataagggaatttttggtc 119
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gctaaactttttaggttttttttttttttaaagttatacataataagggaatttttggtc 320
Query: 120 ttaggagaactataggtgctatgtcagatatctaaagagaaagcaaattatccttcagtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaggagaactataggtgctatgtcagatatctaaagagaaagcaaattatccttcagtg 380
Query: 180 gagactgagcatcattgctccaaataagagagggttttggttgtagttgaagaggaaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagactgagcatcattgctccaaataagagagggttttggttgtagttgaagaggaaaaa 440
Query: 240 gcctgtgaatgatgtaaatagtgaactctcctccatggggtcctgcactaatgaaaggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctgtgaatgatgtaaatagtgaactctcctccatggggtcctgcactaatgaaaggtc 500
Query: 300 tatgcccatccccagacacttatgcctgaaataacaccaccatagggggactcgcaggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgcccatccccagacacttatgcctgaaataacaccaccatagggggactcgcaggct 560
Query: 360 ttattttcttcagtatccatgcctagtcaccgagatgtacccattca 406
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ttattttcttcagtatccatgcctagtcaccgagaggtacccattca 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
