NGCATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCTCTCTGGAGGTGCCTTTCCCATTCACAGGTACACTGTCCT
CTTGAAGGTGATCCTAGATGGCTCAAGTGAGGCCCGGTGACCTGGGCCCT
CTGAGGACTCAGTACAGAGTGGTTTCAAAGAGGAGCCACAAAAAGAGGAA
AACCCACCAAGAGTTGCAGCAGAAGAGCATCTTAGGGAAATGAGCGGGTC
CTGTGTGGCTTTATATCAAAGTAGGAAAGGACACCCCCCCACCCCCACCC
CCCCACACACACACCTTGGTCCTTCCGGAATATGCTTCTTCCCCAATAAG
CCAGACCCCTATCCAGCAGGCCATGCATCTCCATTTGTCTGGCTGTCTCT
GTAGAGGGAACAAAGGAAGGGAGGCAAATTGGTCCATTTAGGAGCAGGCA
AGCAGGTCATGATGCAGGGCTGACATTCTAATAACTGTCTCTGCTATTAG
TTTTCATTTTCCTCTTATCTCGAGATTTTCTTCTTTCTTTAATTCCCATT
GTACGTTTGTTTTTTGTTAACACTCTTGTCTGTCTTAATGCATTTTTAAA
CCTCTATGCCCCCTCTTTATTTACATTTCTTTTTTCCCTTCCCTTTTCCC
TCCCTCTTCAGTTTCGTTTTTACTTCTTTTTCTTTCCTCTTTTCTTCTTC
TTTTCCCCTTCCTTCAACTTTTCTTCTTTCTTCCTCCTTTTTTCCCCCTT
TCACTTTTCCTTTCCCCCTTTCTTTTGTCCCTTCCTTTTT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAAAGCAGAAGAGCGATTTGAGTTGCCTTTGT
CATGGTGCCCCTTCACAGCAATAGAAACCCTAACTTTAAACCAGAACAAA
ACAGAAACAACAAAAAGTCCCATGAACAAACAAATAACAAGAAAACTCCA
AAACCAAAATGAAAGGGCGTGGGCGTCCTGAGATAATGTGCATCTGGGTA
AGGCTTAGTTGTTCCTGGTTAAAAAAAAAAATCCACATCTTTCTCCATTG
AGGATAAGGATTCAGCTTTTCACTGTGACAAATGTCGGAAGGATAAAAAT
AGAAAACTGGAAAAGTATCGAGATGGCCACACAGGTGAGAGGCCACAGAC
CCGCCTATTTGGTTATGAAACTGAGACCAGGAGTTAACAGTTGTTGTAGA
GTGGCCTTGGGCAGTCCTGGGGGACTCAGCTGTCACAAAACAGCTATGGT
GTCTTGTGGACCAGTGCTGGAGCAAGGCTTGCTCACTTGGTAACAATGCA
CAGTGCCCTCCTCTGTATACAGCAGGCACTTACTACGCATGTGTCTCACA
CACTTTCCTTATTCTTGTCATTCTTTGACCGACGGATTCCCCCCGCCCCA
TCCGGTTCTTCTCTTCTATCCGCTTGTAAGACCCACCGTTGCCTCTTTTA
CACTGGTTCCGCCCCCGCCCCTTCTTATTTCTTTCCGCTTAACCCCCATT
TCTCTTTTCTTATTTCCATATAACGTCTCCTCTTTTTTCCTTTCTTGTN

Query= MSMg01no347_j06.b1 MSMg01no347_j06.b1 CHROMAT_FILE:
MSMg01no347_j06.b1 PHD_FILE: MSMg01no347_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:36 2005
         (395 letters)



>mm_chr12_29588437_29589231
          Length = 795

 Score =  748 bits (387), Expect = 0.0
 Identities = 390/391 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccctctctggaggtgcctttcccattcacaggtacactgtcctcttgaaggtgat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaattccctctctggaggtgcctttcccattcacaggtacactgtcctcttgaaggtgat 536

                                                                       
Query: 65  cctagatggctcaagtgaggcccggtgacctgggccctctgaggactcagtacagagtgg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cctagatggctcaagtgaggcccggtgacctgggccctctgaggactcagtacagagtgg 476

                                                                       
Query: 125 tttcaaagaggagccacaaaaagaggaaaacccaccaagagttgcagcagaagagcatct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tttcaaagaggagccacaaaaagaggaaaacccaccaagagttgcagcagaagagcatct 416

                                                                       
Query: 185 tagggaaatgagcgggtcctgtgtggctttatatcaaagtaggaaaggacacccccccac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tagggaaatgagcgggtcctgtgtggctttatatcaaagtaggaaaggacacccccccac 356

                                                                       
Query: 245 ccccacccccccacacacacaccttggtccttccggaatatgcttcttccccaataagcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccccacccccccacacacacaccttggtccttccggaatatgcttcttccccaataagcc 296

                                                                       
Query: 305 agacccctatccagcaggccatgcatctccatttgtctggctgtctctgtagagggaaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agacccctatccagcaggccatgcatctccatttgtctggctgtctctgtagagggaaca 236

                                          
Query: 365 aaggaagggaggcaaattggtccatttagga 395
           |||||||||||||||||||| ||||||||||
Sbjct: 235 aaggaagggaggcaaattggcccatttagga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space:   303396
Effective search space used:   303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no347_j06.g1 MSMg01no347_j06.g1 CHROMAT_FILE:
MSMg01no347_j06.g1 PHD_FILE: MSMg01no347_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:36 2005
         (452 letters)



>mm_chr12_29408513_29409364
          Length = 852

 Score =  859 bits (444), Expect = 0.0
 Identities = 450/452 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagcagaagagcgatttgagttgcctttgtcatggtgccccttcacagcaatagaaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagcagaagagcgatttgagttgcctttgtcatggtgccccttcacagcaatagaaacc 260

                                                                       
Query: 61  ctaactttaaaccagaacaaaacagaaacaacaaaaagtcccatgaacaaacaaataaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaactttaaaccagaacaaaacagaaacaacaaaaagtcccatgaacaaacaaataaca 320

                                                                       
Query: 121 agaaaactccaaaaccaaaatgaaagggcgtgggcgtcctgagataatgtgcatctgggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaaactccaaaaccaaaatgaaagggcgtgggcgtcctgagataatgtgcatctgggt 380

                                                                       
Query: 181 aaggcttagttgttcctggttaaaaaaaaaaatccacatctttctccattgaggataagg 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 aaggcttagttgttcctggttaaaaaaaaatatccacatctttctccattgaggataagg 440

                                                                       
Query: 241 attcagcttttcactgtgacaaatgtcggaaggataaaaatagaaaactggaaaagtatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcagcttttcactgtgacaaatgtcggaaggataaaaatagaaaactggaaaagtatc 500

                                                                       
Query: 301 gagatggccacacaggtgagaggccacagacccgcctatttggttatgaaactgagacca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagatggccacacaggtgagaggccacagacccgcctatttggttatgaaactgagacca 560

                                                                       
Query: 361 ggagttaacagttgttgtagagtggccttgggcagtcctgggggactcagctgtcacaaa 420
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 ggagttaacagttgttgtagagtggctttgggcagtcctgggggactcagctgtcacaaa 620

                                           
Query: 421 acagctatggtgtcttgtggaccagtgctgga 452
           ||||||||||||||||||||||||||||||||
Sbjct: 621 acagctatggtgtcttgtggaccagtgctgga 652


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space:   372164
Effective search space used:   372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)