Query= MSMg01no348_e05.b1 MSMg01no348_e05.b1 CHROMAT_FILE:
MSMg01no348_e05.b1 PHD_FILE: MSMg01no348_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:30 2005
(551 letters)
>mm_chr12_41142999_41143949
Length = 951
Score = 990 bits (512), Expect = 0.0
Identities = 539/548 (98%), Gaps = 2/548 (0%)
Strand = Plus / Plus
Query: 5 gaattcttatcttgctgaggaaacagatgcagatgctaccagatgcttcagctggggtca 64
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttatccaggtgaggaaacagatgcagatgctaccagatgcttcagctggggtca 264
Query: 65 aaggtgagtactgctggtctttagagtgtgtttgccgactcatcctgatggattttggaa 124
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggtgagtactgccggcctttagagtgtgtttgccgactcatcctgatggattttggaa 324
Query: 125 actggataaataatttttttttctttttcagtggctcaagaaaatcacagcctctagctt 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actggataaatattttttttttctttttcagtggctcaagaaaatcacagcctctagctt 384
Query: 185 tgcatgggacacaggaacatttctgtgctatctaactgtgtctacccacttgtctaagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcatgggacacaggaacatttctgtgctatctaactgtgtctacccacttgtctaagga 444
Query: 245 gatgcctaaagacatcggggctttatggtg-caaaggcactttgttctttattcggtttt 303
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 445 gatgcctaaagacatcggggctttatgg-gacaaaggcactttgttctttattcggtttt 503
Query: 304 ctagactgtcgccatctattagcatttcctaactgcatgcagctatccttttgcatctta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctagactgtcgccatctattagcatttcctaactgcatgcagctatccttttgcatctta 563
Query: 364 catgtgctgtaaaaatcccacacaccaacgagactctctctcatcagctacatacttagg 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catgtgctgtaagaatcccacacaccaacgagactctctctcatcagctacatacttagg 623
Query: 424 aatgtcacaggaaaccactgagcttttgctttgcatggagttcatgtgtcactgtacaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatgtcacaggaaaccactgagcttttgctttgcatggagttcatgtgtcactgtacaaa 683
Query: 484 ctgcaccaactcacgtagttacacactactgtagtaaaactatgagtccaaaaagcatgg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctgcaccaactcacgtagttacacactactgtagtaaaactatgagtccaaaaagcatgg 743
Query: 544 agggcctt 551
||||||||
Sbjct: 744 agggcctt 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_e05.g1 MSMg01no348_e05.g1 CHROMAT_FILE:
MSMg01no348_e05.g1 PHD_FILE: MSMg01no348_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:30 2005
(476 letters)
>mm_chr12_41285522_41286396
Length = 875
Score = 733 bits (379), Expect = 0.0
Identities = 409/419 (97%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 58 aatttttaaaacattatttgtttaaaatgaaaatccatactctgatttgccattagggaa 117
||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||
Sbjct: 875 aatttttaaaacattatttgtttaaaaaaaaaatccgtactctaatttgccattagggaa 816
Query: 118 acacgaattaatacacttcctgaaaagtaagtaaaattactagaaaaatgatatccaact 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 acacgaattaatacacttcctgaaaagtaagtaaaattactagaaaaatgatatccaact 756
Query: 178 aaatacagaggtcaaatggaaccagcagtaaggttttaatataagcatgtgtcctatgtt 237
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 755 aaatacagaggtcaaatggaaccagcagtaagattttaatataagcatgtgtcctatgtt 696
Query: 238 acatgggacatacttatactgcctgactggtatcacaggcttttctttgctaaatctagc 297
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 695 acatgggacatacttatactgcctgactggtatcacaagcttttctttgctaaatctagc 636
Query: 298 aattctacctaacagggcaaactggacattctataaataaaaattttgagcttgtaatta 357
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 635 aattctacctaacagggcaaactggacattctataaataaaa-ttttgagcttgtatttc 577
Query: 358 ttttagattgttttcttgtattgatagggaaatgtcttatctatgccaatgttcacttag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttttagattgttttcttgtattgatagggaaatgtcttatctatgccaatgttcacttag 517
Query: 418 acaacatttcagaaattcttcttccctgacacataatttagccatgtctcaatttcctg 476
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 516 acaacatttcagaaattcttcttccctgacacataatttagccatggctcaatttcctg 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 875
Length adjustment: 10
Effective length of query: 466
Effective length of database: 865
Effective search space: 403090
Effective search space used: 403090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
