NNNAAAACTTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATGTGTGCCTGTAGACTGACTTTAAATGTTCTCCCTCCA
TTCAGGAAGCTACATAACATTATATAGATGATGATGATGATGATGAGAGG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGACTGGCAGCCCTAGGGTCCTCATGACATAGAT
GTAATACAGCTGTTCTTACTCCTGTCACCAAATGAGCAAAGGGAAGGCCT
GCGGTTTGCCTTCTCCCCATTGACACAGGCTGATTGTTATTTCCTAACAC
ATTCATACTCTGATTCTTTAAAGCTGTGAACATGCCGCATTGAGCACCCC
TCAGGAGGCTTTGGTGATGAGATGACACTCCCTCATTTGATTAAGGCAGA
CTATATTCTCTAGGAAGCTCATATCCAAACCTCATGTCCTTACCATTGGC
ATATACGTAGACCTCTCCCGACACTGAACGCTGATGTCAGCAACTCGACA
CTCGTTTCAGATACGGACCCCGGCCTTCCCTCCTTGTCCTTCGCGATTAC
CATGGCCCTGCCAAACACCACGCTTCTCATCCTTCCCTTGCCTCTGTTAT
CACCCGACTCCCTTTACCCTATCCCCACTTTTCGCGGCTTCGCCTTTCCT
TCCACCCTCGCGTGCGCGTCCCTCCTTTACCACCCCTATCCATGTCCCCC
TGG

NNNTTTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAAAGCCAAATAAAAT
AGGTGATTGGAGACACAGGTTTATGGAAAATACATCAGATATTGTGAAGT
TGCAGAGCCTTTGCATTGAAAGAAATGTCTTCATCTTCTTCCTTGGTAGT
CTCACCCAGAAGATCTCTTCAATCAGAAGTTTAAAATCCATTTCATATCC
TTATGATAATGTTATCTTCATCTCTTCGTGCTCTCATGAAATTTAATCAG
ACCTTTAAAAATCTAATTTTACAATTCTTAACACACTGCATTAATTTTGT
TATTGAATGTATAATTATAAAAAGAAAAATCCAGCCTGATATCAGCCCAA
CTCAAATGTTCATAGACGAAACGTTACCCCCTTCCATCATCTGTATTCTT
GCTATGGAAATGAGGGCAGAGAATTTGGATTTCAAAGACTGGACAATGAT
GATAATGTTGTTTTAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGNNNTNNNNNNNNNGNNNGNNNNTTNTTGTTTGGTTTTN
TGNNNTNNTTGGTTTNTTTTTTTTNTTTTTTTTGGTTGGTTGGNTGTTTG
TTTNTTTTTTTTTTTTGGGGTTTTTTTTGTGGTTTTGTTGTGTTGTNTTT
TTTTTGGTTTTGGGTTTTGTTGTGGTTTTTTGTTTTTTGGT

Query= MSMg01no351_a24.g1 MSMg01no351_a24.g1 CHROMAT_FILE:
MSMg01no351_a24.g1 PHD_FILE: MSMg01no351_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:13 2005
         (480 letters)



>mm_chr12_15396108_15396987
          Length = 880

 Score =  919 bits (475), Expect = 0.0
 Identities = 478/479 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaaagccaaataaaataggtgattggagacacaggtttatggaaaatacatcagatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaagccaaataaaataggtgattggagacacaggtttatggaaaatacatcagatat 260

                                                                       
Query: 61  tgtgaagttgcagagcctttgcattgaaagaaatgtcttcatcttcttccttggtagtct 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaagttgcagagcctttgcattgaaagaaatgtcttcatcttcttccttggtagtct 320

                                                                       
Query: 121 cacccagaagatctcttcaatcagaagtttaaaatccatttcatatccttatgataatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacccagaagatctcttcaatcagaagtttaaaatccatttcatatccttatgataatgt 380

                                                                       
Query: 181 tatcttcatctcttcgtgctctcatgaaatttaatcagacctttaaaaatctaattttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcttcatctcttcgtgctctcatgaaatttaatcagacctttaaaaatctaattttac 440

                                                                       
Query: 241 aattcttaacacactgcattaattttgttattgaatgtataattataaaaagaaaaatcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattcttaacacactgcattaattttgttattgaatgtataattataaaaagaaaaatcc 500

                                                                       
Query: 301 agcctgatatcagcccaactcaaatgttcatagacgaaacgttacccccttccatcatct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcctgatatcagcccaactcaaatgttcatagacgaaacgttacccccttccatcatct 560

                                                                       
Query: 361 gtattcttgctatggaaatgagggcagagaatttggatttcaaagactggacaatgatga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtattcttgctatggaaatgagggcagagaatttggatttcaaagactggacaatgatga 620

                                                                      
Query: 421 taatgttgttttagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatgttgttttagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 679


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)