Query= MSMg01no351_p13.b1 MSMg01no351_p13.b1 CHROMAT_FILE:
MSMg01no351_p13.b1 PHD_FILE: MSMg01no351_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:20 2005
(342 letters)
>mm_chr12_81825941_81826682
Length = 742
Score = 584 bits (302), Expect = e-171
Identities = 332/342 (97%)
Strand = Plus / Minus
Query: 1 ctcaagtttccgttgccatggcatccccatcataagggtctcacacggcaagccaaaata 60
|||||| |||||||||||||||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 653 ctcaagcttccgttgccatggcatccccaccataagggtctcgcacagcaagccaaaata 594
Query: 61 atccattccttgttccatatctggtaattggtcacagaaacaagaaaagcattaaactgt 120
|||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atccgtttcttgttccatacctggtaattggtcacagaaacaagaaaagcattaaactgt 534
Query: 121 gggaaggcattagaggcaagcggccattcctcacggggacattcatgataggcaaataca 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 533 gggaaggcattagaggcaagcggcccttcctcacggggacattcatgataggcaaataca 474
Query: 181 tggggagcctctgggtattctgggaaattttaaacaccagggcagcctgcacgacacacc 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 473 tggggagcctctgggtattctgggaaatggtaaacaccagggcagcctgcacgacacacc 414
Query: 241 tcctcagccgggaaactaactgaataacagtaactcacttctgcaggaaactatccgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcctcagccgggaaactaactgaataacagtaactcacttctgcaggaaactatccgaac 354
Query: 301 agcagaaatccagtaactcatttctgcctctcctgattatga 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agcagaaatccagtaactcatttctgcctctcctgattatga 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_p13.g1 MSMg01no351_p13.g1 CHROMAT_FILE:
MSMg01no351_p13.g1 PHD_FILE: MSMg01no351_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:20 2005
(583 letters)
>mm_chr12_81758272_81759254
Length = 983
Score = 1106 bits (572), Expect = 0.0
Identities = 581/584 (99%), Gaps = 1/584 (0%)
Strand = Plus / Plus
Query: 1 agttgtgtagaccaggctggcctcgaatttagagatccacctgcctctgtctcctgagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgtgtagaccaggctggcctcgaatttagagatccacctgcctctgtctcctgagta 260
Query: 61 ttggtgttaaagtatttgccaccactgcttggccttctgttttaatttttaacatggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggtgttaaagtatttgccaccactgcttggccttctgttttaatttttaacatggttg 320
Query: 121 aataggtgatatatgtataattttatattttcctttttgtttgggaattatttccttatc 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaggtgatatatgtataattttatattttcctttttgtttgggaattatttccttatc 380
Query: 181 attttcctttattgttcaaatttaatatagccattttcaaatgtcttcactagattcagt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttccctttattgttcaaatttaatatagccattttcaaatgtcttcactagattcagt 440
Query: 241 catttattaatgctgaaattcttgtgtattcatttgttcttgatgtgatagattgagtga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttattaatgctgaaattcttgtgtattcatttgttcttgatgtgatagattgagtga 500
Query: 301 atttttttatgtctaaaactgtggccatatttcaagttttaagaatagaataataaaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttttttatgtctaaaactgtggccatatttcaagttttaagaatagaataataaaggt 560
Query: 361 gggaggtggtggcccacgcctctaatctcagcactgggaggcagaggcaggcagatcgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggaggtggtggcccacgcctctaatctcagcactgggaggcagaggcaggcagatcgct 620
Query: 421 gtgagttccaggacagcctctggtctacagagggagttccaggacagtgaggacaacacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgagttccaggacagcctctggtctacagagggagttccaggacagtgaggacaacacc 680
Query: 481 aaagaaaccctgtctcaaaaaa-cagtggaataatggagccaggtgttgtggcctggcac 539
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaagaaaccctgtctcaaaaaaacagtggaataatggagccaggtgttgtggcctggcac 740
Query: 540 accccttggaggcagatgcaggtgaatctctgtgagttggggac 583
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 accccttggaggcagatgcaggtgaatctctgtgagttggggac 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
