Query= MSMg01no352_o01.b1 MSMg01no352_o01.b1 CHROMAT_FILE:
MSMg01no352_o01.b1 PHD_FILE: MSMg01no352_o01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:34 2005
(514 letters)
>mm_chr12_75852066_75852979
Length = 914
Score = 774 bits (400), Expect = 0.0
Identities = 442/458 (96%), Gaps = 7/458 (1%)
Strand = Plus / Minus
Query: 59 gtaatgtggagtacagagatttaaaactgaggacctgatgtaagcaagacatttgtcttt 118
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 914 gtaatgtggagtacagagatttaaaactgaggacctgctgtaagcaagacatttgtcttt 855
Query: 119 ggggaaatttaaatcagtttcacaatgttagaacatt-aaaaaaaaagatgtctaccaat 177
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 854 ggggaaatttaaatcagtttcacaatgttagaacattaaaaaaaaaagatgtctaccaat 795
Query: 178 gtttacatggattctctggaaggtagcatacatattacagaaaactgatggactgtacaa 237
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 794 gtttacatggattctctggaaggtagcatatatattacagaaaactgatggactgt---- 739
Query: 238 acaaacaaacaaacaaacaaacaaccccacccccaataaaataatccccaaaagaacaag 297
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 738 acaaacaaacaaacaaacaaacaaccccacccccaataaaacaatccccaaaagaacaa- 680
Query: 298 t-gtggaaatacactagaatgcatttttaaagttttagtatgtagatttataaataaaaa 356
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcgtggaaatacactagaatgcatttttaaagttttagtatgtagatttataaataaaaa 620
Query: 357 taagaattcacataacacacacagttattatttttctatagttatgtgtcccagcttgat 416
||| ||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 619 taaaaattcacataaaatatacagttattatttttctctagttatgtgtcccagcttgat 560
Query: 417 cctggagaagacagctatcaagaagaaactaaaaagacatggaatcaccatgactggatc 476
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 559 cctggagaagacagctatcaagaagaaactaaaaagacatggaatcaccatgcctggatc 500
Query: 477 ccaggcacccttaaaggagcccctacacttggggatgg 514
||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccaggcacccttaaaggagcccctacacttggggatgg 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_o01.g1 MSMg01no352_o01.g1 CHROMAT_FILE:
MSMg01no352_o01.g1 PHD_FILE: MSMg01no352_o01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:35 2005
(383 letters)
>mm_chr12_75791908_75792690
Length = 783
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%)
Strand = Plus / Plus
Query: 1 aggtgtctcctctttcatatacaaaatatgggtgagtgggaactctgaattcacaggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgtctcctctttcatatacaaaatatgggtgagtgggaactctgaattcacaggctg 260
Query: 61 ggagacttggtgatccaaccatggcttatttggcaggcctgtaattatagtgcattaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagacttggtgatccaaccatggcttatttggcaggcctgtaattatagtgcattaagg 320
Query: 121 gatacaaaagctctaggactggataagtaccagaaacctctcttgtcttttattatctag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatacaaaagctctaggactggataagtaccagaaacctctcttgtcttttattatctag 380
Query: 181 gtttccaaggtgatgggagtgtaggaagaattaggaagagagtggaagaggaaagtgtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttccaaggtgatgggagtgtaggaagaattaggaagagagtggaagaggaaagtgtaa 440
Query: 241 tattgtggataatcatagttataaaacttttttcaaagtatctgacttcttaagggtcgg 300
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tattgtggctaatcatagttataaaacttttttcaaagcatctgacttcttaagggtcgg 500
Query: 301 ggatttccctgggctcgactgacatgctctgctaatgctttacaaaactgaagaatctga 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ggatttccctgggctcgactgacatgctctgctaatgctttagaaaactgaagaatctga 560
Query: 361 agctgctgtgggggaaagatctg 383
|||||||||||| | ||||||||
Sbjct: 561 agctgctgtgggagtaagatctg 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
