NNNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTCAGAGTCCAGCTGTCTCTGGGATCCTGAGATCCCGCA
TGTGTCAGAGCTCCTGGGAGTCAAGCTGCCTCTGGGGCCCTGAGATCCTG
GTGTGACCAAGCTCCTAGGATCCTGGGATCCTGTGGTCCTGGGCGTGTTA
GAGCGCCTTCAAGTGGATCTTCCTCTGGGTGTTGTGGGACTGGCTGTGGA
GTTTGCGCTGGCCCAGACAGGAAGGAACCTATGCCAGTGGTCTGGCGGAG
TTCCTGGGTGCCTGGGTCTCACTGGTCCTAGATACTTCTGGTGTTAGGAC
AGATGTTGTGTCCTCCTCACCTCTGATCCTATGATCCTGGGAGTGTTGGA
GCGCCTGGGAGTGGGTCTTCCTCTGCCTGTTATGGAACTGGTTGTGGAGT
TCACACCTAAGGTCTGCTCAGGGCACTGGTCCAGATCTTCTTTAAACTCT
TGAAAAAATACAATTCTATCATGCTATAACTTATTTTAATTTTATGATTC
AATGAATTTTAATTAGTTTACAGAATGCTGCAACAATTTCTGTAAGTCCA
ACTAAACATATTTTTCATTACTTTAAAAAGGGATCTTATATGCTGGGCGT
GGGATATGCTTTTTATCCTAGTCCTTGGGAAGCAGAAAAAGGCATTTTTC
TGAATTTTAGACCCATCCCGGGCCACAGAGGGATTTCCATGAAAACCAGG

NNNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGCCCCCTGATTGCC
ACAACACACACATTACATCTACACTAAATAGATGCATATGCTTTTCTCTG
CTAACTGGTCCTGTTTGATAAGGCTCTCTGCCATAAACATAGCCTAGAGT
AAGAAAAGGATGCTTCACTTCTCTAGCGCCAGTGATTGCAGTGAAACACT
GTACATGGCATGTGAGTCTCCCAAAAGCGGGCAAAAGGGACCGAGGTTCC
TTGGAACTACCTAGAGTCGGGTTCAAAGTAAACCCCATTTCCCCTTATTC
GGGTGGTTAGAGTAAAGCCAGCATTCCTCAGGAACTTGTAAAACCGGTTC
CCCTCTACCAAAGGAGGATAGCCCCCTTATCACAGGAAGAAGGGATACTT
GGCTGTCCAGTGGTACCTATTAGCATATCAACGCTCATGCTGGCCTCCAG
GCTCCCTCAGTACCACAAGAACCTGTTACTTATTTCAGAGTCCAGGCTAA
TGTCCTGGNTCTTCTCAGCCCCGCCCCTACCTTAAATTTCTCCCGCTCAG
GGGTGTCCCTCTTCCCAGAAAATCATCTTTTCCTTATAACCCTGGGATTT
TTGGGCATTCTCTTTCTTTCCTTTCTCCCCTTCTTTCCCCCTTTATCCCC
ACATTCTCNTATATATCCTTTTTTTTTTTTAGCCCCCCTTCAATATTCGT
TGTTCCTGTTTATCCCCCCTAATTT

Query= MSMg01no353_h17.g1 MSMg01no353_h17.g1 CHROMAT_FILE:
MSMg01no353_h17.g1 PHD_FILE: MSMg01no353_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:22 2005
         (438 letters)



>mm_chr12_74485569_74486411
          Length = 843

 Score =  636 bits (329), Expect = 0.0
 Identities = 390/413 (94%), Gaps = 9/413 (2%)
 Strand = Plus / Minus

                                                                       
Query: 33  acatctacactaaatagatgcatatgcttttctctgctaactggtcctgtttgataaggc 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 acatctacactaaatagatgcatatgcttttctctgctaactggtcctgtttgataaggc 584

                                                                       
Query: 93  tctctgccataaacatagcctagagtaagaaaagga--tgcttcac-ttctctagcgcca 149
           |||||||||||||||||||||||||||||||||| |  |||||| | |||||||| ||||
Sbjct: 583 tctctgccataaacatagcctagagtaagaaaagaaagtgcttc-cgttctctagtgcca 525

                                                                       
Query: 150 gtgattgcagtgaaacactgtacatggcatgtgagtctcccaaaagcgggcaaaagggac 209
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 524 gtgattgcagtgaaacactgtacatggcatgtgactctcccaaaagcgggcaaaagggac 465

                                                                       
Query: 210 cgaggttccttggaactacctagagtcgggttcaaagtaaaccc----catttcccctta 265
            ||||||||||||||||||||||||| |||||||||| ||||||    ||||||||||||
Sbjct: 464 tgaggttccttggaactacctagagttgggttcaaaggaaacccaccccatttcccctta 405

                                                                       
Query: 266 ttcgggtggttagagtaaagccagcattcctcaggaacttgtaaaaccggttcccctcta 325
           ||| ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 404 ttccggtggttagagaaaagccagcattcttcaggaacttgtaaaaccagttcccctcta 345

                                                                       
Query: 326 ccaaaggaggatagcccccttatcacaggaagaagggatacttggctgtccagtggtacc 385
           ||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||
Sbjct: 344 ccaaaggaggatagctcccttatcacaggaagaggggatacttggctgtcg-gtggtacc 286

                                                                
Query: 386 tattagcatatcaacgctcatgctggcctccaggctccctcagtaccacaaga 438
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 285 tattagcatatcaacgctcatgcaggcctccaggctccctcagtaccacaaga 233


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 843
Length adjustment: 9
Effective length of query: 429
Effective length of database: 834
Effective search space:   357786
Effective search space used:   357786
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)