Query= MSMg01no355_g23.b1 MSMg01no355_g23.b1 CHROMAT_FILE:
MSMg01no355_g23.b1 PHD_FILE: MSMg01no355_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:53 2005
(543 letters)
>mm_chr12_64280175_64281119
Length = 945
Score = 980 bits (507), Expect = 0.0
Identities = 532/541 (98%), Gaps = 5/541 (0%)
Strand = Plus / Minus
Query: 5 gaattctttgagtcacctcttttatactatttcctgctgttcctcaaacagttgtttttg 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 gaattctttgagccacctcttttatactatttcctgctgttcctcaaacagttgtttttg 870
Query: 65 tagattggtgtgcacaattctacatttttatctatctattttttatttatttatttattt 124
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 869 tagattggtgtgcacaattctacatttttatctatcta-tttttatttatttatttattt 811
Query: 125 atttatttatttttatttgtaatggccatctgttagaaaaggaggtttcattgatgaggg 184
||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 810 atttattta--tttattcgtaatggtcatctgttagaaaaggaggtttcattgatgaggg 753
Query: 185 atgagaaactgataactagaaagtttgtctttga-ttttttttcttttaaagcactagca 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 752 atgagaaactgataactagaaagtttgtctttgatttttttttcttttaaagcactagca 693
Query: 244 ttcatgatgaaacatcccatagttatctgagcatcaacctactgcaaacaacttcacctg 303
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ttcatgatgagacatcccatagttatctgagcatcaacctactgcaaacaacttcacctg 633
Query: 304 tgacactcgcttcaagttgttccatgtcatggattcgcactacctttgtaatactttcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgacactcgcttcaagttgttccatgtcatggattcgcactacctttgtaatactttcaa 573
Query: 364 gggaaaatattctgcacaccttaagcaaaatgatcgttcacaaagaaggcagaggattta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gggaaaatattctgcacaccttaagcaaaatgatcgttcacaaagaaggcagaggattta 513
Query: 424 tatttctctttatcttttttcctttt-aaaaatcttctctcacatgctacaaccaaactt 482
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 512 tatttctctttatcttttttccttttaaaaaatcttctctcacatgctacaaccaaactt 453
Query: 483 cagatttttattcctccactcatccttctttctaaaaaccccatctccttcccctttttc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cagatttttattcctccactcatccttctttctaaaaaccccatctccttcccctttttc 393
Query: 543 a 543
|
Sbjct: 392 a 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 945
Length adjustment: 10
Effective length of query: 533
Effective length of database: 935
Effective search space: 498355
Effective search space used: 498355
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_g23.g1 MSMg01no355_g23.g1 CHROMAT_FILE:
MSMg01no355_g23.g1 PHD_FILE: MSMg01no355_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:53 2005
(389 letters)
>mm_chr12_64082939_64083727
Length = 789
Score = 636 bits (329), Expect = 0.0
Identities = 348/357 (97%), Gaps = 6/357 (1%)
Strand = Plus / Plus
Query: 35 aaaagttgtctggcatccataagtgctacacacacacacacac--taaaatcttaattaa 92
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 237 aaaagttgtctggcatccataagtgctacacacacacacacacactaaaatcttaattaa 296
Query: 93 ttaattaatcaattaattgagattctaaagccttataataaaattatgaactacaagtgt 152
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttaat----caattaattgagattctaaagccttataataaaattatgaactacaagtgt 352
Query: 153 ctttttccagggaaagtcagaaaaaaataaaaataaaaaagatgagggacatggaaagaa 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctttttccagggaaagtcagaaaaaaataaaaataaaaaagatgagggacatggaaagaa 412
Query: 213 ccttacttcacctgtagattgttactggctttggggagagtataaaaggttttagtgata 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccttacttcacctgtagattgttactggctttggggagagtataaaaggttttagtgata 472
Query: 273 cattagataacaatacaagttttgggaaagaaaaaatatttaaaatttttgttcagggta 332
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 473 cattagctaacaatacaagttttgataaagaaaaaatatttaaaatttttgttcagggta 532
Query: 333 tttttggcaatgtgaaaaaccataggaatattttcccttgaagacaagtataactta 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tttttggcaatgtgaaaaaccataggaatattttcccttgaagacaagtataactta 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
