Query= MSMg01no355_i17.b1 MSMg01no355_i17.b1 CHROMAT_FILE:
MSMg01no355_i17.b1 PHD_FILE: MSMg01no355_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:01 2005
(483 letters)
>mm_chr12_101253574_101254456
Length = 883
Score = 872 bits (451), Expect = 0.0
Identities = 472/479 (98%)
Strand = Plus / Plus
Query: 5 gaattcctgacttgctcaaaacatctccattttctttatatgtgtgtgtatgtgtgtgtt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgacttggtcaaaacatctccattttctttatatgtgtgtgtatgtgtgtgtt 264
Query: 65 atattatatatagagagatagttatctatatatttatatagaaagttgatataactatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atattatatatagagagatagttatctatatatttatatagaaagttgatataactatag 324
Query: 125 atagcacaaatatgttacgaatacttctaatgaaatgtatgtctataggtctaccaccaa 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atagcacaaatatgttacaaatacttctaatgaaatgtatgtctataggtctaccaccaa 384
Query: 185 ttcaaggatatgggtcttctcatcaccatgccattccttgtgtgcttcccccccctcccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaaggatatgggtcttctcatcaccatgccattccttgtgtgcttcccccccctcccc 444
Query: 245 acaccccctcctggagagaagcccacgtggttattattccccagttttccaaatactttt 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 acaccccctcctggagagaagcccacgtggttattatcccccagttttccaaatactttt 504
Query: 305 atcacacatgtctacaaccttaagtgatgtattgcttcctttgaggttctaatgttcaca 364
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 505 atcacacatgtctacaaccttaagtgatatattgcttcctttgaggttctaatgttcaca 564
Query: 365 aaagcatcgtagtgaacttagtcaaaggcaactttgtggcagccttactgctgtgtctct 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaagcatcatagtgaacttagtcaaaggcaactttgtggcagccttactgctgtgtctct 624
Query: 425 aagattcatttacactgtggtttacccacactatattcctaggtctctgcttctatgtc 483
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 625 aagattcatttacactgtgttttacccacactgtattcctaggtctctgcttctatgtc 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_i17.g1 MSMg01no355_i17.g1 CHROMAT_FILE:
MSMg01no355_i17.g1 PHD_FILE: MSMg01no355_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:01 2005
(451 letters)
>mm_chr12_101482540_101483387
Length = 848
Score = 741 bits (383), Expect = 0.0
Identities = 426/451 (94%), Gaps = 18/451 (3%)
Strand = Plus / Minus
Query: 1 cctgtgccctgtaattggaaatgtgtcattgataatcactgtattttaaatggctaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cctgtgccctgtaattggaaatgtgtcattgataatcactgtattttaaatggctaacag 678
Query: 61 acaggtagcatacccagctatgggaccactcccttacagtcagttcccttttgccatccc 120
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 677 acaggtagcatacccagctatgggaccac---------------tcccttttgccatccc 633
Query: 121 tagctgtcccgctggagaggcttgacctgggctgtaatgctgcacacccccccatccctc 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 632 tagctgtcccgctggagaggcttgacctgggctgtaatgctgca---ccccccatctctc 576
Query: 181 cctcctcccctcctacatccctatgggaaagctccccattaagagatggctagggaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cctcctcccctcctacatccctatgggaaagctccccattaagagatggctagggaatta 516
Query: 241 gagtcttgagtctaggcctagccctgcagatgccagcctccgaggttgctgggttgctag 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gagccttgagtctaggcctagccctgcagatgccagcctccgaggttgctgggttgctag 456
Query: 301 gatacgaagctcccagagccttcacaagctgcttccttctggagcagctcatggacaaga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 455 gatacgaagctcccagagccttctcaagctgcttccttctggagcagctcatggacaaga 396
Query: 361 atgggcagggcatgctgagggtgggagaagatagtgccctgcaaataggcctgtcagggg 420
||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||
Sbjct: 395 atgggcagggcatgctgagggtgggaggagatagtgtcctgcaaacaggccggtcagggg 336
Query: 421 ctccaggccccacctaggactccatggagtt 451
|||||||||||||||||||||||||||||||
Sbjct: 335 ctccaggccccacctaggactccatggagtt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 848
Length adjustment: 10
Effective length of query: 441
Effective length of database: 838
Effective search space: 369558
Effective search space used: 369558
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
