Query= MSMg01no355_k16.b1 MSMg01no355_k16.b1 CHROMAT_FILE:
MSMg01no355_k16.b1 PHD_FILE: MSMg01no355_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:11 2005
(585 letters)
>mm_chr12_31893929_31894914
Length = 986
Score = 1073 bits (555), Expect = 0.0
Identities = 576/583 (98%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctggt-tcaacctgggttctgtgatcacatctatggctgctgacaccctcccg 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggaattcctggtcacaacctgggttctgtgatcacatctatggctgctgacaccctcccg 727
Query: 63 gcagtgacacatgccagtgtctgggtcacatacaggcctctgggatccttctttgttgta 122
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gcagtgatacatgccagtgtctgggtcacatacaggcctctgggatccttctttgttgta 667
Query: 123 gtcacaagctgtaaaggacgagtgaagaagcagagaatgttacccaatctgtttgttcct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gtcacaagctgtaaaggacgagtgaagaagcagagaatgttacccaatctgtttgttcct 607
Query: 183 agcttaaaaatcaacccttccctcctcccctgggattctccccaattcatgtttccaagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agcttaaaaatcaacccttccctcctcccctgggattctccccaattcatgtttccaagg 547
Query: 243 caacaatttaaaaacagtatgatttcagagacccgtgcgagatcattaaaatacaacctg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 caacaatttaaaaacagtatgatttcagagacccgtgcgagatcattaaaatacaacctg 487
Query: 303 cctctctctagtctatcagaaaaccaactcatggtttctgatggaaaaattaaatgcggt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 486 cctctctctagtctatcagaaaaccaactcatggtttctgatggaaaaattaaatgcagt 427
Query: 363 ttctattgtggctgtgcacgtggggtctttatctgcttgaatgaggcatgtggacttaat 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 426 ttctattgtggctgtgcacgtggggtctttatctgcttgaatgaggcatgtggatttaat 367
Query: 423 agtggccatcacagcaggactaagaagtctcagggccacactgagaatcctgcctggggg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agtggccatcacagcaggactaagaagtctcagggccacactgagaatcctgcctggggg 307
Query: 483 tgctgactcttgctgattttcattctacatgattactttgttctttaagggatgggagaa 542
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 306 tgctgactcttgctgattttcattctacaggattactttgttctttaggggatgggagaa 247
Query: 543 ggagccttgtctttgacctaatgaaagaaaacatctgatgtca 585
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggagccttgtctttgacctaatgaaagaaaacatctgatgtca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 986
Length adjustment: 10
Effective length of query: 575
Effective length of database: 976
Effective search space: 561200
Effective search space used: 561200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_k16.g1 MSMg01no355_k16.g1 CHROMAT_FILE:
MSMg01no355_k16.g1 PHD_FILE: MSMg01no355_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:11 2005
(476 letters)
>mm_chr12_31714843_31715718
Length = 876
Score = 897 bits (464), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Plus
Query: 1 taaatgcttattcttataactgaagacaagtgcagctctcatccttcatccaagaatctt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaatgcttatacttataactgaagacaagtgcagctctcatccttcatccaagaatctt 260
Query: 61 ccctttgcagcagagaccattacagaaagctgtaactggtccaaatcagattacaactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctttgcagcagagaccattacagaaagctgtaactggtccaaatcagattacaactga 320
Query: 121 cagttgggtgccaagctctgcttgttatgtctacaatactatgcccatgcctgaggttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttgggtgccaagctctgcttgttatgtctacaatactatgcccatgcctgaggttca 380
Query: 181 gggaatatcttggaataggagtcagagagattgtaagagctagaggaccagagagtatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaatatcttggaataggagtcagagagattgtaagagctagaggaccagagagtatga 440
Query: 241 tgcaagatcgtgtcttctatgtgttaggggagctacaccccagactcagcaatatatggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcaagatcgtgtcttctatgtgttaggggagctacaccccagactcagcaatatatggc 500
Query: 301 tgcctaagcaagatctaacaacactgggtagcatgctggtgttactttgaggaccttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcctaagcaagatctaacaacactgggtagcatgctggtgttactttgaggaccttcat 560
Query: 361 cttctcatacacaaagcataccatctacttcaatggtgtttaaggtagcaggagacatct 420
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 561 cttctcatacacaaagcataccatctacttctatggtgtttaaggtggcaggagacatct 620
Query: 421 gcattccaacttatccttctgagttgtttgtccttgacaaacaagagtcaactaac 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcattccaacttatccttctgagttgtttgtccttgacaaacaagagtcaactaac 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
