Query= MSMg01no355_n13.b1 MSMg01no355_n13.b1 CHROMAT_FILE:
MSMg01no355_n13.b1 PHD_FILE: MSMg01no355_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:24 2005
(534 letters)
>mm_chr12_77996273_77997206
Length = 934
Score = 1011 bits (523), Expect = 0.0
Identities = 529/531 (99%)
Strand = Plus / Minus
Query: 4 ggaattctgtcctccagggtgtgacgtggctgctacagtcttgaaatcagagcagttgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ggaattctgtcctccagggtgtgacgtggctgctacagtcttgaaatcagagcagttgtg 519
Query: 64 atgacttcaatagatcctcacaagatagtgtctattaatattcctgtgtaggaggagggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atgacttcaatagatcctcacaagatagtgtctattaatattcctgtgtaggaggagggt 459
Query: 124 gggggcggggcatcagacccttattggagacactggccactccttttctgaaacctgctt 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 458 gggggcggggcatcagacccttattggagacactggccacttcttttctgaaacctgctt 399
Query: 184 ccccactaggtgtatgtaatcctgacctgagctgtacgtggtcttaggtgctagagagta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ccccactaggtgtatgtaatcctgacctgagctgtacgtggtcttaggtgctagagagta 339
Query: 244 tgtaggaggtagaagattgcttggggtgaggatctgaataaagcagctatcatgactaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgtaggaggtagaagattgcttggggtgaggatctgaataaagcagctatcatgactaaa 279
Query: 304 ctgtttctttggcctgttattttccaatctactgagggtgaacagaaattcgcctcctag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctgtttctttggcctgttattttccaatctactgagggtgaacagaaattcgcctcctag 219
Query: 364 gacaagacaatcagcaactagtggccgggcaggggatgaatggaaccagagatgagttga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gacaagacaatcagcaactagtggccgggcaggggatgaatggaaccagagatgagttga 159
Query: 424 gggcagtacagttacatggcctctgctaaaggagatgggctagcaactgaggctgagcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gggcagtacagttacatggcctctgctaaaggagatgggctagcaactgaggctgagcca 99
Query: 484 tctgaggggagagcatccagggggcgctccaatgtggccttctttccccat 534
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tctgagggaagagcatccagggggcgctccaatgtggccttctttccccat 48
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_n13.g1 MSMg01no355_n13.g1 CHROMAT_FILE:
MSMg01no355_n13.g1 PHD_FILE: MSMg01no355_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:24 2005
(269 letters)
>mm_chr12_77866948_77867617
Length = 670
Score = 468 bits (242), Expect = e-136
Identities = 263/270 (97%), Gaps = 1/270 (0%)
Strand = Plus / Plus
Query: 1 tgagctacacttccagcctctggttctaacccacgtttgaagatggtagaactggtcccc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tgagctacacttccagcctctggttctaacccacgtttgaagatggcagaactggtcccc 260
Query: 61 agagaggacctatcacctgcccaagtatgagagccgagactagattgtgatcttcctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 agagaggacctatcacctgcccaagtatgagagccgagactagattgtgatctccctctc 320
Query: 121 cgcctcgtcccgcactcttttccttgcgccttccctttccccttcccttat-agcactga 179
|||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 321 cgcctcgtcccgttctcttttccttgcgccttccctttccccttcccttcttagcactga 380
Query: 180 ggcctgaccccagcatgtgtccctaccaggcaagcactctgccaacagaactataccccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcctgaccccagcatgtgtccctaccaggcaagcactctgccaacagaactataccccc 440
Query: 240 agctcttattttaagcctttgcgcctctcg 269
|||||||||||||||||||||||||||||
Sbjct: 441 tgctcttattttaagcctttgcgcctctcg 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 670
Length adjustment: 9
Effective length of query: 260
Effective length of database: 661
Effective search space: 171860
Effective search space used: 171860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
