Query= MSMg01no356_b24.b1 MSMg01no356_b24.b1 CHROMAT_FILE:
MSMg01no356_b24.b1 PHD_FILE: MSMg01no356_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:45 2005
(491 letters)
>mm_chr12_81786812_81787701
Length = 890
Score = 864 bits (447), Expect = 0.0
Identities = 477/487 (97%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgatccttctcgctttagccttccagtttttgggactgcaggtatgttccacc 64
||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatggtccacct-gctttaggcttccagtttttgggactgcaggtatgttccacc 263
Query: 65 acaccctgctacaggactcccttttgatagatgaatctagagggtttcagtacttactgt 124
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 acaccctgctacagggctcccttttgatagatgaatctagagggtttcagtatttactgt 323
Query: 125 cagcctttctattgagagaagatggagctaatgccggtgcctaatctctgctattcggcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagcctttctattgagagaagatggagctaatgccggtgcctaatctctgctattcggcc 383
Query: 185 tgataaattctttattcagttctacatgagggaccaaccccctggctctcactcagggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgataaattctttattcagttctacatgagggaccaaccccctggctctcactcagggat 443
Query: 245 gttttgggaatgtgtgagattataacaataaatggcttatgggtttactagccaacatat 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 gttttgggaatgtgtgagattataacaataaatggcttataggtttactagccaacatat 503
Query: 305 ctcaacatacctgcccaaacccaaaataaaatatccatgttctttgaagctaaattaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcaacatacctgcccaaacccaaaataaaatatccatgttctttgaagctaaattaaaa 563
Query: 365 tgtgtattttaatccacatagtaccctcaagggacagcatcataagcatttctgagaggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgtattttaatccacatagtaccctcaagggacagcatcataagcatttctgagaggt 623
Query: 425 ctgctgctccagtgatgccctggggttccaaaagcccatattagtgttagggggtggcag 484
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 624 ctgctgctccagtgatgccttggggttccaaaagcccatattagtgttagagggtggcag 683
Query: 485 gccagtg 491
|||||||
Sbjct: 684 gccagtg 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 890
Length adjustment: 10
Effective length of query: 481
Effective length of database: 880
Effective search space: 423280
Effective search space used: 423280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_b24.g1 MSMg01no356_b24.g1 CHROMAT_FILE:
MSMg01no356_b24.g1 PHD_FILE: MSMg01no356_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:45 2005
(373 letters)
>mm_chr12_81960011_81960784
Length = 774
Score = 667 bits (345), Expect = 0.0
Identities = 366/379 (96%), Gaps = 11/379 (2%)
Strand = Plus / Minus
Query: 1 tttcgttgacttagaaatcatctgttgagtactatgctccaaggcagccctaggttttta 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tttcattgacttagaaatcatctgttgagtactatgctccaaggcagccctaggttttta 515
Query: 61 agagtaaataagacagcatctatccttgaagagaatccagtctctccagggttacaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 agagtaaataagacagcatctatccttgaagagaatccagtctctccagggttacaaata 455
Query: 121 aagagtctcaagtcggtttaagctttagagttcatgtaaggattgcatttatccatctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagagtctcaagtcggtttaagctttagagttcatgtaaggattgcatttatccatctac 395
Query: 181 tcccttgaaagttttactaagtaccaaggcctgtgctaggcaatggaggaaggcagggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tcccttgaaagttttactaagtaccaaggcctgtgctaggcaatggaggaaggcagggag 335
Query: 241 agcgatgaaaa------ttttttggcctgactctcttgggggcttttatctagtaagtga 294
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agcgatgaaaaccacag-----tggcctgactctcttgggggcttttatctagtaagtga 280
Query: 295 caatggcaaaaatcaatatgggatacaagaggttttgaataaggattaatccaatggaga 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 279 caatggcaaaaatcaatatgggatacaagaggttttgaataaggattaatccaatgaaga 220
Query: 355 agaggtggaagaaattaga 373
|||||||||||||||||||
Sbjct: 219 agaggtggaagaaattaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 774
Length adjustment: 9
Effective length of query: 364
Effective length of database: 765
Effective search space: 278460
Effective search space used: 278460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
