Query= MSMg01no356_j11.b1 MSMg01no356_j11.b1 CHROMAT_FILE:
MSMg01no356_j11.b1 PHD_FILE: MSMg01no356_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:22 2005
(561 letters)
>mm_chr12_96299687_96300647
Length = 961
Score = 615 bits (318), Expect = e-180
Identities = 342/350 (97%), Gaps = 2/350 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgtatctcactggatggaataagcatatgtattacatttttacatatgtatt 64
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgtatctcactggatggaataagcgtatgtattacatttttacatatgtatt 264
Query: 65 acaagaaataatcatttgagatattactcttaaaatataatagttgacttcatttcaatt 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 acaagaaataatcatttgagatattgctcttaaaatataatagttgacttcatttcaatt 324
Query: 125 aattaagattaatataatttctgaatgattagaataaatcaattacagagaatttcacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aattaagattaatataatttctgaatgattagaataaatcaattacagagaatttcacag 384
Query: 185 atgtactcaggaagtaatctatgtcaaatttgattattcacttatagaagcaaaaattcc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 385 atgtactcaggaagtaatctatgtcaaatttgattattcacttatagaagcaaaaatttc 444
Query: 245 aggttttgataatatctatatttcttcattgaatttatataagcaatatgcttagttgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggttttgataatatctatatttcttcattgaatttatataagcaatatgcttagttgca 504
Query: 305 tataattaatagatgctttcctttttctttttctttttcttttt-ctttt 353
||||||||||||||||||| ||||||||||||||||| ||| || |||||
Sbjct: 505 tataattaatagatgctttactttttctttttctttt-cttattgctttt 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_j11.g1 MSMg01no356_j11.g1 CHROMAT_FILE:
MSMg01no356_j11.g1 PHD_FILE: MSMg01no356_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:22 2005
(413 letters)
>mm_chr12_96418801_96419613
Length = 813
Score = 779 bits (403), Expect = 0.0
Identities = 409/411 (99%)
Strand = Plus / Minus
Query: 1 actgttggtgctggctgctttctgtttttcctgtctgagatacaagtagggttgaaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 actgttggtgctggctgctttctgtttttcctgtctgagatacaagtagggttgaaagca 552
Query: 61 gaagtattgatggggaagagctatcaccattctcagcctcatagggactgttggtgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 551 gaagtattgatggggaagagctatcaccattctcagcctcatagggactgttggtgttag 492
Query: 121 tacacacaaataacaaaagcctctgcgtgaatgatggattaattattttttttttttggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cacacacaaataacaaaagcctctgcgtgaatgatggattaattattttttttttttggt 432
Query: 181 ctaatggcctcttattcatgttttttatgccctcgtttgttaacactactcgacacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctaatggcctcttattcatgttttttatgccctcgtttgttaacactactcgacacttct 372
Query: 241 cttcatttttaatgagtccttggaaaatggacacagtactcatcctaattgttagtactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cttcatttttaatgagtccttggaaaatggacacagtactcatcctaattgttagtactg 312
Query: 301 gaggattcattcacattttgttagccagaacaacatacaaaataggacactcattggact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaggattcattcacattttgttagccagaacaacatacaaaataggacactcattggact 252
Query: 361 caagggaaagagaaaattgtgcatcatttgaggttaaaataagacaaagaa 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 caagggaaagagaaaattgtgcatcatttgaggttaaaataagacaaagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
