XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CAGCATTTGCGAATCTTCCTATAATATGACACACTTTCTATTTAGCCTAA
AGCAAACTTAATTAACTCTGAACACTTCGGTTACTTGTGATAAATCTAGT
GATGTGTTCTTTGAGTAAATGAATCAACTTCTCAGGGTAATGTAAATTTC
CATAATTATAGTGTCTTTCTAACATGGCACAATGCATGTGCCTTAAATGA
AGTTCATTTAAATTTAGGTAAAGTGGGCAATACTTGCAAATTTATTTTCT
TTTTTTAAAATGAGAATTTATTTTCCCCCACACTAGGTAGTTATTCAGCT
ACATGAATATATTTCTCTAAGGTACTAGAAGTGACAAGGTAAATAGCGCT
AACTGCAGACTCTAAGAACCACCCAGACATCAAGTATGATTTAAATATAC
TTCAGACCATGGGGAAAAGAAATCACTAATTGGGTTCCTTTTTCAAAAAA
AAAAAGTACTTTTTCATGAGCTTATTGAAAGGTTTGAAAGGCTGTTATAG
ATTTTAGCTTTTTAAATAAGTGAGCTACACGACTGACTTGCATGTACTGA
AAACCACTTATCGCAGAAGCACAACTGACTATGATGTCATTTTAGGACTC
AAGCCCCACATCTGTATCTACTCTATGGCTGTTTTTGCGCTACCCACATT
GATATCCTTTAACTTACATAATCCCTCATGTCTAATAATGATG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCTGTTCCTGCAAGCAAAGTGTGTGGTGTG
GTATGAGATCTTCTATGGTTGCTATAGAGGATAACCAAGCGCACTGGTAA
TTGACTAAACCGTTTTGAAGAACTCTGGTGTCTCCTTGACAAAAAAACGT
ATTAAGGGGCATTTCATGCCTTATAATGTAATTTTCATTGTGTAATCCCT
GTCTTTTCAAATTGTCATGGCCCATGTATAAAAGATGATTTTGTTCTAAC
ACTCCTTTTAAAGTATTATTTTAGAATTTGCTAGTGGGGGAACCTGAGAC
TGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGCC
CCTTCCGCTCCACTCGAGCCCCGGCCTACCTTGCCAGCAGAGTTTCTCCC
AACACCTGCAAGGTCCCACACAGGAATCCCCACGGGATCCTAACACCTCT
GGTGAGCGCATACCTGTGCCTGGTCCATTCTTATCGCTGTGGCAACCTTG
AACCTTTTTATGATTTTCTTACCCTTTCGATTTTCCGCCTTTATTATTTC
CTCTGTATCCTTTATCCTTTTCTCTTTCTTCTACATGCTTTTCCCTTGTC
CGATTTTTACCTACTTTCTCTCTTTTCCTTTTTTCTCCTTTTCTTTTCTT
TCTTTTTTTTCCCCCCTTTTTTACCCATATTTTCCTTCACCTTTCCTCCT
TCACTCTTTGCTCN

Query= MSMg01no356_m04.b1 MSMg01no356_m04.b1 CHROMAT_FILE:
MSMg01no356_m04.b1 PHD_FILE: MSMg01no356_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:35 2005
         (532 letters)



>mm_chr12_95694988_95695919
          Length = 932

 Score =  948 bits (490), Expect = 0.0
 Identities = 519/530 (97%), Gaps = 4/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcagcatttgcgaatcttcctataatatgacacactttctatttagcctaaagc 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagcatttgggaatcttcctataatatgacacactttctatttagcctaaagc 264

                                                                       
Query: 65  aaacttaattaactctgaacacttcggttacttgtgataaatctagtgatgtgttctttg 124
           |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 265 aaacttaattaactctgagcacttctgttacttgtgataaatccagtgatgtgttctttg 324

                                                                       
Query: 125 agtaaatgaatcaacttctcagggtaatgtaaatttccataattatagt--gtctttcta 182
           |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 325 agtaaacgaatcaacttctcagggtaatgtaaatttccataattatagtatgtctttcta 384

                                                                       
Query: 183 acatggcacaatgcatgtgccttaaatgaagttcatttaaatttaggtaaagtgggcaat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatggcacaatgcatgtgccttaaatgaagttcatttaaatttaggtaaagtgggcaat 444

                                                                       
Query: 243 acttgcaaatttattttctttttttaaaatgagaatttattttcccccacactaggtagt 302
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 acttgcaaatttattttctttttttaaaatgagaatttattttccctcacactaggtagt 504

                                                                       
Query: 303 tattcagctacatgaatatatttctctaaggtactagaagtgacaaggtaaatagcgcta 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tattcagctacatgaatatatttctctaaggtactagaagtgacaaggtaaatagcgcta 564

                                                                       
Query: 363 actgcagactctaagaaccacccagacatcaagtatgatttaaatatacttcagaccatg 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actgcagactctaagaaccacccagacatcaagtatgatttaaatatacttcagaccatg 624

                                                                       
Query: 423 gggaaaagaaatcactaattgggttcctttttcaaaaaaaaaaagtactttttcatgagc 482
           ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||
Sbjct: 625 gggaaaagaaatcactaattgggttcctttttcaaaaaaaaa--gtactttttcataagc 682

                                                             
Query: 483 ttattgaaaggtttgaaaggctgttatagattttagctttttaaataagt 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttattgaaaggtttgaaaggctgttatagattttagctttttaaataagt 732


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space:   481284
Effective search space used:   481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)