Query= MSMg01no356_n24.b1 MSMg01no356_n24.b1 CHROMAT_FILE:
MSMg01no356_n24.b1 PHD_FILE: MSMg01no356_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:44 2005
(441 letters)
>mm_chr12_26786220_26787060
Length = 841
Score = 837 bits (433), Expect = 0.0
Identities = 436/437 (99%)
Strand = Plus / Plus
Query: 5 gaattctcttcttttctttcccctccccttacccctctgtactcagacatttagatctct 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttctttcctttcccctccccttacccctctgtactcagacatttagatctct 264
Query: 65 aataaaatcgaattatcattcccatgttttatttgagtcagggcctcatcctataaccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aataaaatcgaattatcattcccatgttttatttgagtcagggcctcatcctataaccca 324
Query: 125 ggctgttttcaaactcgcagcaattctttcttagaccccaaaatgctggtgttagaggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggctgttttcaaactcgcagcaattctttcttagaccccaaaatgctggtgttagaggca 384
Query: 185 tcagctaccataaccagcaataatatgataataaacatgttaaatgaatcttcctttcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagctaccataaccagcaataatatgataataaacatgttaaatgaatcttcctttcct 444
Query: 245 accatcatctaataatattatctgcttcccctcctcctttccatgtcttgctgctctgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accatcatctaataatattatctgcttcccctcctcctttccatgtcttgctgctctgct 504
Query: 305 tctccttacctctgtatctagcaccgagctctaagtgggccatctcttcttattcttaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctccttacctctgtatctagcaccgagctctaagtgggccatctcttcttattcttaca 564
Query: 365 tagttgatgtagaaagcagggaacagagctgtccccctggccttggtgatggagacatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagttgatgtagaaagcagggaacagagctgtccccctggccttggtgatggagacatct 624
Query: 425 acaaaagccattgcctg 441
|||||||||||||||||
Sbjct: 625 acaaaagccattgcctg 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_n24.g1 MSMg01no356_n24.g1 CHROMAT_FILE:
MSMg01no356_n24.g1 PHD_FILE: MSMg01no356_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:44 2005
(253 letters)
>mm_chr12_26865930_26866581
Length = 652
Score = 474 bits (245), Expect = e-138
Identities = 251/253 (99%), Gaps = 1/253 (0%)
Strand = Plus / Minus
Query: 1 attcttctgtggaaggaaaaatgaaatctctctgcttccctcttgtttttattgtttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 attcttctgtggaaggaaaaatgaaatctctctgcttccctcttgtttttattgtttttt 393
Query: 61 gtttttgttttcatcttctacctcttttctttattcaacatacattttgtatatccaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtttttgttttcatcttctacctcttttctttattcaacatacattttgtatatccaaag 333
Query: 121 acaacaatgttttaggcctgggatgagaagatggaaagtcaaggtcttcactcgccccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acaacaatgttttaggcctgggatgagaagatggaaagtcaaggtcttcactcgccccca 273
Query: 181 ccccagaatcttccacagaaggagcaagaaaacccaaaatatgtatctcagttttttttt 240
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 272 ccccagaagcttccacagaaggagcaagaaaacccaaaatatgtatctcag-tttttttt 214
Query: 241 tttttcatcttgg 253
|||||||||||||
Sbjct: 213 tttttcatcttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 652
Length adjustment: 9
Effective length of query: 244
Effective length of database: 643
Effective search space: 156892
Effective search space used: 156892
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
