Query= MSMg01no357_a07.b1 MSMg01no357_a07.b1 CHROMAT_FILE:
MSMg01no357_a07.b1 PHD_FILE: MSMg01no357_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:54 2005
(454 letters)
>mm_chr12_8870246_8871099
Length = 854
Score = 775 bits (401), Expect = 0.0
Identities = 407/409 (99%)
Strand = Plus / Minus
Query: 1 aggtccctccccagtgcagtctgtgtttggcaaaccctaccttagcctggcataatataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aggtccctccccagtgcagtctgtgtttggcaaaccctaccttagcctggcataatataa 350
Query: 61 caatcaacatgctaagaacaaaagccaaacacccttgtcaactaaaaaccctggcagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caatcaacatgctaagaacaaaagccaaacacccttgtcaactaaaaaccctggcagatg 290
Query: 121 aaacagtggtgctaggagataaggttcaggcgatctagtaattaggacaaactaaccaaa 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aaacagcggtgctaggagataaggttcaggcgatctagtaattaggacaaactaaccaaa 230
Query: 181 agatggaaagtaggggagatttaaaaataggattaggggtgtcattcaatgtttgcctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 agatggaaagtaggggagatttaaaaataggattaggggtgtcattcaatgtttgcctag 170
Query: 241 catgcaagaagccctggggtccatccttacacatcacaagtcaggcttatggtgtaaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 catgcaagaagccctggggtccatccttacacatcacaagtcaggcttatggtgtaaacc 110
Query: 301 tggaatcccagacatggaaagtagaagtgggaggagggtctgaagttcaaggtcatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tggaatcccagacatggaaagtagaagtgggaggagggtctgaagttcaaggtcatcctc 50
Query: 361 agggagggatcgagtttgcagctggtctgggcttcttagaccctatgta 409
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 49 agggagggagcgagtttgcagctggtctgggcttcttagaccctatgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_a07.g1 MSMg01no357_a07.g1 CHROMAT_FILE:
MSMg01no357_a07.g1 PHD_FILE: MSMg01no357_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:55 2005
(459 letters)
>mm_chr12_8697538_8698396
Length = 859
Score = 679 bits (351), Expect = 0.0
Identities = 406/459 (88%), Gaps = 53/459 (11%)
Strand = Plus / Plus
Query: 1 ttggatatctatcctttgtattcagcattgtatgaaatatctattttacttttattctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggatatctatcctttgtattcagcattgtatgaaatatctattttacttttattctta 260
Query: 61 taataatgagaatgtgtaaagctatcttaccagtatcacgcctaacaaaatttgttttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taataatgagaatgtgtaaagctatcttaccagtatcacgcctaacaaaatttgttttca 320
Query: 121 caaagcattttgtatttggttgtgagaatcaaaattcaaacacagcttacatagtttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagcattttgtatttggttgtgagaatcaaaattcaaacacagcttac---------- 370
Query: 181 gcatttaagttgtaggtctatataataatagttcattttccctccactttagaattttca 240
|||||||||||||||||
Sbjct: 371 -------------------------------------------ccactttagaattttca 387
Query: 241 ctttgtagatgtattagtgaaatcagttgatgtctaccttacctgcacattctggatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctttgtagatgtattagtgaaatcagttgatgtctaccttacctgcacattctggatttg 447
Query: 301 ttagtttcttaatgtatctattttttttttattctcaagttcctgctaaagtttaggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttagtttcttaatgtatctattttttttttattctcaagttcctgctaaagtttaggctt 507
Query: 361 gggctcttttgattttagtcatgattctttataatgggtggcactatttcaaactacatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gggctcttttgattttagtcatgattctttataatgggtggcactatttcaaactacatt 567
Query: 421 aattatacagtgaggcttatgtcttgttctgctttttgg 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aattatacagtgaggcttatgtcttgttctgctttttgg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
