Query= MSMg01no357_b19.b1 MSMg01no357_b19.b1 CHROMAT_FILE:
MSMg01no357_b19.b1 PHD_FILE: MSMg01no357_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:01 2005
(499 letters)
>mm_chr12_83394121_83395017
Length = 897
Score = 895 bits (463), Expect = 0.0
Identities = 485/493 (98%), Gaps = 2/493 (0%)
Strand = Plus / Plus
Query: 7 attcactctgtataccaggctggcctcgaactcagaaatccgcctgcctctgcctcccaa 66
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 207 attcactctgtagaccaggctggccttgaactcagaaatccgcctgcctctgcctcccaa 266
Query: 67 gtgctgggatcaaaggcgtgtgccacccccaccctctgttctgttttcttttgttgtaat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtgctgggatcaaaggcgtgtgccacccccaccctctgttctgttttcttttgttgtaat 326
Query: 127 ttttcttctttcttggctagtctaagtagtaaaaaattgtgaattttactgatttttttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttcttctttcttggctagtctaagtagtaaaaaattgtgaattttactgatttttttt 386
Query: 187 tcccaaaaagccattttttttggctttactgttttctctattatcattgtttagtttatt 246
| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttccaaaaagccatttttt--ggctttactgttttctctattatcattgtttagtttatt 444
Query: 247 aaatgagatgagttgaagtctttcttttgttctgttaaagtttaaaaataaagttctagg 306
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 aaatgagatgagttgaagtctttcttttgttctgctaaagtttaaaaataaagttctagg 504
Query: 307 ggctggagatatggctcagcagttaagagtactggctgcttttccagagttcagttccca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggctggagatatggctcagcagttaagagtactggctgcttttccagagttcagttccca 564
Query: 367 gcaaccacatggtggctcacaatcatatataatgtaatctcatgccctcttctggcatgc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcaaccacatggtggctcacaatcatatataatgtaatctcatgccctcttctggcatgc 624
Query: 427 aggtgcgcatgcagatagaacactcatacacattaagtaagtaaatgcataaataaatac 486
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 625 aggtgcgcatgcagatagagcactcatacacattaagtaagtaaacgcataaataaatac 684
Query: 487 ataaatgtttaaa 499
|||||||||||||
Sbjct: 685 ataaatgtttaaa 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 897
Length adjustment: 10
Effective length of query: 489
Effective length of database: 887
Effective search space: 433743
Effective search space used: 433743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_b19.g1 MSMg01no357_b19.g1 CHROMAT_FILE:
MSMg01no357_b19.g1 PHD_FILE: MSMg01no357_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:01 2005
(433 letters)
>mm_chr12_83575307_83576140
Length = 834
Score = 607 bits (314), Expect = e-178
Identities = 326/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Minus
Query: 105 catgtagagagacaagaaaaggaaattggatatcctgatggcaaaagtcagaatcatcaa 164
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 834 catgtagagagacaagaaaaggaaattggatatcctgatggcaaaagtcaaaatcatcaa 775
Query: 165 ggaatgcccctaaccagcaggaagtagtctaatgatattgatgcctcccttttccctctc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggaatgcccctaaccagcaggaagtagtctaatgatattgatgcctcccttttccctctc 715
Query: 225 cctctcgttctctcaagggacaagggtggagaaggatggtagacataggaccccataaag 284
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 714 cctctcgttctctcaagggacaagggtggagaaggatggtagacataggaacccataaag 655
Query: 285 tagccagaaagccagccatactcctcagcctctcaaatgccacctcacacttgtgcccac 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tagccagaaagccagccatactcctcagcctctcaaatgccacctcacacttgtgcccac 595
Query: 345 acctcccaggggtccccagtgcctggtccatcagcccctc-cttcatgtcacctgcttgg 403
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 594 acctcccaggggtccccagtgcctggtccatcagcccccctcttcatgtcacctgcttgg 535
Query: 404 ccctgtggacactgaaggtcaaggacaccc 433
||||||||||||||||||||||||||||||
Sbjct: 534 ccctgtggacactgaaggtcaaggacaccc 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
