Query= MSMg01no357_c18.b1 MSMg01no357_c18.b1 CHROMAT_FILE:
MSMg01no357_c18.b1 PHD_FILE: MSMg01no357_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:05 2005
(567 letters)
>mm_chr12_91856887_91857853
Length = 967
Score = 847 bits (438), Expect = 0.0
Identities = 459/466 (98%)
Strand = Plus / Minus
Query: 100 ttagtcccctatatgatttaggataggcaaagatcctttcccaatctgttggtggtcttt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ttagtcccctatatgatttaggataggcaaagatcctttcccaatctgttggtggtcttt 908
Query: 160 ttgtcttgttgacggtgtcttttgccttgcagaagctttgcaactttatgaggtcccatt 219
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 907 ttgtcttgttgacggtgtcttttgccttgcagaagctttgcaactttacgaggtcccatt 848
Query: 220 tatcgattcttgatcttacagcacaagccattgctgttctattcaggaacttttcccctg 279
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 847 tatcgattcttgatcttacagcagaagccattgctgttctattcaggaacttttcccctg 788
Query: 280 tacccatatcttcgaggtttttccctactttctcctctataagtttcaatgtctctggtt 339
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tacccatatctttgaggcttttccctactttctcctctataagtttcaatgtctctggtt 728
Query: 340 ttatgtggagttccttaatttattatcaattatgaagttttgaaggatgttgtatgtagc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ttatgtggagttccttaatttattatcaattatgaagttttgaaggatgttgtatgtagc 668
Query: 400 ctagggtcctcttaatataagtcttcctgtttctacttcctgcatacagataacataagt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ctagggtcctcttaatataagtcttcctgtttctacttcctgcatacagataacataagt 608
Query: 460 atgtacccacactctgctgcctcatttcctttagaaaaggaactaaaatggaaatagact 519
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atgtacccacactctgctgcttcatttcctttagaaaaggaactaaaatggaaatagacc 548
Query: 520 gatatttgtcaccttgcacaaagctcaagtccaagtggatcaaagg 565
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aatatttgtcaccttgcacaaagctcaagtccaagtggatcaaagg 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_c18.g1 MSMg01no357_c18.g1 CHROMAT_FILE:
MSMg01no357_c18.g1 PHD_FILE: MSMg01no357_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:06 2005
(436 letters)
>mm_chr12_91679912_91680747
Length = 836
Score = 812 bits (420), Expect = 0.0
Identities = 435/444 (97%), Gaps = 8/444 (1%)
Strand = Plus / Plus
Query: 1 aaatgattctgaaattcttaactgctttagaattactgagtgaaccatatggtctagctt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 aaatgattctgaaattcttaactgctttagaattactgagtgaatcatatggtctagctt 260
Query: 61 tggaaggttattcattactgatttagcttctcagatagatgttgttctatttaactgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaaggttattcattactgatttagcttctcagatagatgttgttctatttaactgtat 320
Query: 121 agttcttcttgtggaagtttaaaaaatacttttcttctgctttttgttgagaattttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcttcttgtggaagtttaaaaaatacttttcttctgctttttgttgagaattttaaa 380
Query: 181 tggtcttattgctttttttctcctttgtatatccattatactttcaaataaagttccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtcttattgctttttttctcctttgtatatccattatactttcaaataaagttccaat 440
Query: 241 atgcaactacaagatttacaattctgttttcaaatagcactttactgcattatagattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgcaactacaagatttacaattctgttttcaaatagcactttactgcattatagattgt 500
Query: 301 tgtgtctgatactttttggtaataagataaaacaagtctgattcctctcttcattcttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtctgatactttttggtaataagataaaacaagtctgattcctctcttcattcttaa 560
Query: 361 tatgattgctgcatatatttcacaagtacaagagcatttcatatatatatatata----c 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 tatgattgctgcatatatttcacaagtacaagagcatttcatatatatatatatatatac 620
Query: 417 atatatatata----atttcacaa 436
||||||||||| |||||||||
Sbjct: 621 atatatatatatataatttcacaa 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
