Query= MSMg01no358_a03.b1 MSMg01no358_a03.b1 CHROMAT_FILE:
MSMg01no358_a03.b1 PHD_FILE: MSMg01no358_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:10 2005
(560 letters)
>mm_chr12_46431189_46432150
Length = 962
Score = 975 bits (504), Expect = 0.0
Identities = 547/562 (97%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 1 acaatggagcaatgttcagtctatggtaggactcttgttgagtggtgagtctatcatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaatggagcaatgttcagtctatggtaggactcttgttgagtggtgagtctatcatatg 260
Query: 61 gctccttgacaggggatatttaacacttcagggtgattatttagcatttatgacttcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctccttgacaggggatatttaacacttcagggtgattatttagcatttatgacttcaaa 320
Query: 121 taaataattttgagatctagatgtggcttttgtttccttcttgatctgcactgatgtggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 taaataattttgagatctagatgtggcttttgtttccttcttgatctgcattgatgtggt 380
Query: 181 tgttcatctcttagtgcttggtctggtactgtgtggatgagattggcagtgctggctgca 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttcttctcttagtgcttggtctggtactgtgtggatgagattggcagtgctggctgca 440
Query: 241 gctgctagctataaacacaacatgtttttttatggttggggtttcagtggatagatgtta 300
||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 441 gctgctagctataaacacaacatgtttctttatggtcggagtttcagtggatagatgtta 500
Query: 301 ttaatggtgattagttgggctgtaatagaatgatcactatcacattttc--cccctgttg 358
|||||||||||||||||| |||||||||||| | |||||||||||||| || ||||||
Sbjct: 501 ttaatggtgattagttggactgtaatagaataaccactatcacatttttttccactgttg 560
Query: 359 atcccaggatgatctttattggctttccaccatggtagaagggtaaggaaaggattccat 418
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 atcccaggatgatcttaattggctttccaccatggtagaagggtaaggaaagtattccat 620
Query: 419 aaatatatcccacagaagggacagggccaaattgcttcatgcatctcatcgtctttgatc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatatatcccacagaagggacagggccaaattgcttcatgcatctcatcgtctttgatc 680
Query: 479 ctcaggagggtatatgccctgtgatgtgcgcttctttttccttcctactgaggcctgaga 538
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttaggagggtatatgccctgtgatgtgcgcttctttttccttcctactgaggcctgaga 740
Query: 539 ttttggaacttcagtagcttca 560
||||||||||||||||||||||
Sbjct: 741 ttttggaacttcagtagcttca 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 962
Length adjustment: 10
Effective length of query: 550
Effective length of database: 952
Effective search space: 523600
Effective search space used: 523600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_a03.g1 MSMg01no358_a03.g1 CHROMAT_FILE:
MSMg01no358_a03.g1 PHD_FILE: MSMg01no358_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:10 2005
(570 letters)
>mm_chr12_46592454_46593423
Length = 970
Score = 1087 bits (562), Expect = 0.0
Identities = 568/570 (99%)
Strand = Plus / Minus
Query: 1 tcttctttcgtggatcacatacagtgtcaggaaggtgatgaaaactgcagacctaatttc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tcttctttcgtgggtcacatacagtgtcaggaaggtgatgaaaactgcagacctaatttc 711
Query: 61 tagaatgaaagaaacactatattatgtacataacccagatacggttttatatccaattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tagaatgaaagaaacactatattatgtacataacccagatacggttttatatccaattac 651
Query: 121 tggaagtaaaactgggaattcatacatgctcttactaggtcctcatgggaaataatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tggaagtaaaactgggaattcatacatgctcttactaggtcctcatgggaaataatttaa 591
Query: 181 ctttcattgacaaatgatattagttcatacaacagctttgtgcattatgtacccactaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ctttcattgacaaatgatattagttcatacaacagctttgtgcattatgtacccactaat 531
Query: 241 aactcagtaatagaaatgactcatcaaagagaaagaagtctaagtggattaggtccctga 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 530 aactcagtaatagaaatgactcatcaaagagaaagaagtctaagtggactaggtccctga 471
Query: 301 gtgctgtcccagagttctgtccccatattcatatatccaagttataggtgaagaaagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtgctgtcccagagttctgtccccatattcatatatccaagttataggtgaagaaagcaa 411
Query: 361 cattgtcccaagaaatggtgtgacctcattaaatatgagtcaatttagtcttaaattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cattgtcccaagaaatggtgtgacctcattaaatatgagtcaatttagtcttaaattgat 351
Query: 421 agctaaactttcctgttatttaaaatattgctctattagtctctagagcatttttaaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agctaaactttcctgttatttaaaatattgctctattagtctctagagcatttttaaaaa 291
Query: 481 cctcaaatcaattatcctgcccaaaagatataattgaaatgttgatcatggatatagata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cctcaaatcaattatcctgcccaaaagatataattgaaatgttgatcatggatatagata 231
Query: 541 gctatctccattgaaatcataactacctaa 570
||||||||||||||||||||||||||||||
Sbjct: 230 gctatctccattgaaatcataactacctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
