Query= MSMg01no359_i05.b1 MSMg01no359_i05.b1 CHROMAT_FILE:
MSMg01no359_i05.b1 PHD_FILE: MSMg01no359_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:01 2005
(405 letters)
>mm_chr12_107254473_107255277
Length = 805
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 56 aaagtacagagcttggaaagacagtgcaggagaacgcaaagacaagcccagggactgaaa 115
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaagtacagagcttggaaagacactgcaggagaacgcaaagacaagcccagggactgaaa 746
Query: 116 gaatatactcacaagccatgcatttggcaaagagggatctagagcatttttttaaagctc 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaatatactcacaagccatgcatttggcaaagagggatctagagcatttttttaaagctc 686
Query: 176 t-gagaaaacaaacaatccaattacaaagtgggcaaaagacgtgaaagggtcctgtcatc 234
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tggagaaaacaaacaatccaattacaaagtgggcaaaagacgtgaaagggtcctgtcatc 626
Query: 235 aaagaagtgagaggcaagtaagtagagattagctcttggggaagtgaaagaggaaaaaaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagaagtgagaggcaagtaagtagagattagctcttggggaagtgaaagaggaaaaaaa 566
Query: 295 acctgggcctagggaggcgggactgagctgggcctagggaggcggctgtgcgagcaaagt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acctgggcctagggaggcgggactgagctgggcctagggaggcggctgtgcgagcaaagt 506
Query: 355 ctggcaattctttttttgtttttttgtttttgggttttggg-ttttt 400
||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 ctggcaattctttttttgtttttttgtttttgggttttgggcttttt 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_i05.g1 MSMg01no359_i05.g1 CHROMAT_FILE:
MSMg01no359_i05.g1 PHD_FILE: MSMg01no359_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:01 2005
(201 letters)
>mm_chr12_107217699_107218298
Length = 600
Score = 362 bits (187), Expect = e-104
Identities = 193/195 (98%), Gaps = 1/195 (0%)
Strand = Plus / Plus
Query: 1 cgtgatagctcttgtcatggtgtgttatttatttacactcacaagactaacttccttgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cgtgatagctcttgtcatggtgtgttatttatttacactcacaagactaacttccttgac 260
Query: 61 aacccaaccaagatatgctcagtcccaaagctttcgacacaaggggcttgggacacagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacccaaccaagatatgctcagtcccaaagctttcgacacaaggggcttgggacacagat 320
Query: 121 gtttcctacagatgtgagggtgatgggcaggtggatggatctgggtaacaaaggggtgga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gtttcctacagatgtgagggtgatgggcagatggatggatctgggtaacaaaggggtgga 380
Query: 181 tgaatggggggaagg 195
|||||||||| ||||
Sbjct: 381 tgaatggggg-aagg 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 600
Length adjustment: 8
Effective length of query: 193
Effective length of database: 592
Effective search space: 114256
Effective search space used: 114256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
