XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGCATTTGCA
AGCAAGTATTATTTTGAAAAATGGGAGAAATACTTGACTATCTGAGTTAG
AAGGGTTGCCAAAATGTTTTGGAAACCTAGTTGATGCTGGAGCACAAATT
TATAGTGACATCTGGATTTAACTGCACAGGTGCAAAGGAAGACAGATAAT
TAGATTCGACCTGATCTAGGATTTTGCCAAACATGTGCTGAAAGGACACA
GCGACAAAACACTATACAAATTTAGCAGATCTTGGTGAAAATAAAGCACT
TATTATCCTTCTGAAATGACTGGGAGATAGGTGGCAGTATAATGATGCAT
GCTTTTTTGTTAAAATTTACTAATTCTGTATGCTTGATTAATAAATGTGT
AGCTTATATGAGAAGCAAGTCAGGGAATCACATTTTAGTACTTAGGGGAT
TTGAAGTAGCTAAAAGCAGTAGTAAATTTATATAAATTCTTTTTACAATA
TAGATCAGAATTGTTGGTTTCCACATGATGCTACTCACTCTTACCTGGAA
AGGGGATTTCCTTGGGGCATATGTGATGCATAAACACCGTTGTCTTCCCA
CACTGAGTTACATAGCTGGCTTCAGTCTTGGAAGTCATCCTTGTGTATAG
CTTATTTATCACCTTGAAACTTCTTCCGAATAACTTCTTATGCAACATGC
CCCGGCTCTTGCCTTTTTTCCTTGCAAGCCCATATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTATTTACAGAATAGACTACATGTTCAACTGTATAGCACGT
CTTGACAAATACAGAAAGTCCTGGTAAATCTGTATCAGGGTTTAAATTAT
GAAATAAAATAAAATAAAATAAAATAAGATGATCAACTATAAGAATATTT
AAAAGAGTGTTTCTGTGTCTATGTGTTTCTTAAACATTTTTCTTTGAGTC
CTTTTCTAATGTTTATTAGTTTTTGTCCTATTCTGTTTTTGTTTTTTCTT
CTAAATAATTTTACTTCATTATTATTACTTAATATTTGTCTTTGTAAGAT
AGAAAGAGTGCATGGATTTGAGTAGGCGAGGAAGTGCGGAGGATTTGGGA
GAAATTCAGGGAGGACAAACCATAATCAGAATGTATTATATCTAAAAAGC
TATTTTCAATGACAAATATTAAAACACATGTAAATTAAATAACATGTTAA
AGAATGAACAGTGGCTCACTGAAGATATTACAAATGGAGTGAGCTTCTGA
ACTTGAATAATTTTGAAAATAGTAACTACTCATTGCAAAATTAAACGGGA
TGGAATTAACTAAATTTTATAGTAATAAATTCCCTCCGACTTTAATATAG
ACCATATCCCCCCCGGGTTCCCCGATTTTTAGTTACATTATAACCTTATT
TACCCAATTTTCTTATTTGCACAACATTGACGTTGTTTGAATATAN

Query= MSMg01no359_k07.b1 MSMg01no359_k07.b1 CHROMAT_FILE:
MSMg01no359_k07.b1 PHD_FILE: MSMg01no359_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:10 2005
         (515 letters)



>mm_chr12_49576032_49576946
          Length = 915

 Score =  944 bits (488), Expect = 0.0
 Identities = 503/508 (99%)
 Strand = Plus / Minus

                                                                       
Query: 8   attattttgaaaaatgggagaaatacttgactatctgagttagaagggttgccaaaatgt 67
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 attattttgaagaatgggagaaatacttgactatctgagttagaagggttgccaaaatgt 856

                                                                       
Query: 68  tttggaaacctagttgatgctggagcacaaatttatagtgacatctggatttaactgcac 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tttggaaacctagttgatgctggagcacaaatttatagtgacatctggatttaactgcac 796

                                                                       
Query: 128 aggtgcaaaggaagacagataattagattcgacctgatctaggattttgccaaacatgtg 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 aggtgcaaaggaagacagataattagattcgacctgatctaggattttgccaaacatgtg 736

                                                                       
Query: 188 ctgaaaggacacagcgacaaaacactatacaaatttagcagatcttggtgaaaataaagc 247
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 735 ctgaaaggacacagcgacaaaacactatacacatttagcagatcttggtgaaaataaagc 676

                                                                       
Query: 248 acttattatccttctgaaatgactgggagataggtggcagtataatgatgcatgcttttt 307
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acttattatccttctgaaatgactgggagataggtggcagtataatgatgcatgcttttt 616

                                                                       
Query: 308 tgttaaaatttactaattctgtatgcttgattaataaatgtgtagcttatatgagaagca 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tgttaaaatttactaattctgtatgcttgattaataaatgtgtagcttatatgagaagca 556

                                                                       
Query: 368 agtcagggaatcacattttagtacttaggggatttgaagtagctaaaagcagtagtaaat 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 555 agtcagggaatcacattttagtacttaggggatttgaagtagctaaaagcagttgtaaat 496

                                                                       
Query: 428 ttatataaattctttttacaatatagatcagaattgttggtttccacatgatgctactca 487
           |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 495 ttatataaattctttttataatatagatcagaattgttggtttccacatgatgttactca 436

                                       
Query: 488 ctcttacctggaaaggggatttccttgg 515
           ||||||||||||||||||||||||||||
Sbjct: 435 ctcttacctggaaaggggatttccttgg 408


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space:   457025
Effective search space used:   457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)