Query= MSMg01no360_l01.b1 MSMg01no360_l01.b1 CHROMAT_FILE:
MSMg01no360_l01.b1 PHD_FILE: MSMg01no360_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:30 2005
(324 letters)
>mm_chr12_39162449_39163172
Length = 724
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 1 actcactgctatatattctacataaacagatattaatttcataattaaaagtaatcttgt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actcactgctatatattctagataaacagatattaatttcataattaaaagtaatcttgt 465
Query: 61 gtaaataccctgcaggcctcaatgaatcaaacacatactgtgtgtcaggcctcccactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gtaaataccctgcaggcctcaatgaatcaaacacatactgtgtgtcaggcctcccactgt 405
Query: 121 cttcaagtggaacgcactggctggataattagatagtacatattttttaaccttatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cttcaagtggaacgcactggctggataattagatagtacatattttttaaccttatttgc 345
Query: 181 atgcatattatatcttttgcacactgacaatcagcagtaacaacaaaagtcagattacca 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 344 atgcatattatatcttttgcacactgacaagcagcagtaacaacaaaagtcagattacca 285
Query: 241 cagggaattcccacaaagaagtcttcattccttataatttgcagcctaaattaaaataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cagggaattcccacaaagaagtcttcattccttataatttgcagcctaaattaaaataat 225
Query: 301 ttgatctttgacaaggatgaaatg 324
||||||||||||||||||||||||
Sbjct: 224 ttgatctttgacaaggatgaaatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_l01.g1 MSMg01no360_l01.g1 CHROMAT_FILE:
MSMg01no360_l01.g1 PHD_FILE: MSMg01no360_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:30 2005
(387 letters)
>mm_chr12_38998669_38999449
Length = 781
Score = 615 bits (318), Expect = e-180
Identities = 365/384 (95%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 1 cttcctcattacttttgacaattttattgtttttgtaattagagttctatggacattttg 60
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 201 cttcctcattacttttgacaattttattgttttttttattagagttctatggacattttg 260
Query: 61 tgcataaatggtaagaatggaaagctcttttgttatatcaattgtgtgagaaaggaagaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tgcataaatggtaagaatggaaagctcttttgttatattaattgtgtgagaaaggaagaa 320
Query: 121 agacattttcaggttcaagctgttctttacatgaattttacaataaagaaatgtggaatt 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 agacatttgcaggttcaagctattctttacatgaattttacaataaagaaatgtgaaatt 380
Query: 181 aatttttatatttttgtaagattgataatgttatctttctcatcactcttaggtagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 aatttttatatttttgtaagattgataatgttatctttctcatcactcttaggtagttaa 440
Query: 241 gctttgaatattttattttatcttaagtgtcaatttccttggtatagtttgcatttttta 300
| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct: 441 gttttgaatattttattttgttttaagtgtcaatttccttggtatagtgtgcatttttta 500
Query: 301 aatttaccttataatatccaaggaaaatgagacatgaaattccttttatctacattaatt 360
||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aatttaccttataatatgcaaggaaaatgagacatgaaattcctt------acattaatt 554
Query: 361 ccattttctggtgaaacttactag 384
||||||||||| ||||||||||||
Sbjct: 555 ccattttctggggaaacttactag 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 781
Length adjustment: 9
Effective length of query: 378
Effective length of database: 772
Effective search space: 291816
Effective search space used: 291816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
