CCCTACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTAATTTACTCACTTGGTAAGTGGGCAGTAAGCACCTATAGTT
ACAGGCATTCAAAAAGGATTGTCTTACCAAGATAGAGACTCTTACTTTGG
TACAAAAGATGCATCAACACTGTAAGACTAACTGTTGGTATTGTTCATCA
AAAGCCTAGGCTAGTTTAGTAGCCAAGCTTTGAGCTTAAAATAGGTGGGA
GAACTGACTCACACTTTCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCC
CTCCCTCCTTTCTCCTTTCCTTCCTGCCTTCCTTCCTCTCCTCCTTCCTT
CCTTCCTTTTTCTCTCTCTTTTGTCATTTCTTATTTCCTTTCCACAAAAT
AAGAAAAATATCAAAATGCTCATTTTCCCCAGGATCAGTAATTTCTAGAT
GGCCTCCAGGCTCTCCCAAGCCCTCATTCAGTATACTTTATGGTCACTTT
TGGTCCTCACATACATTTGAACAGGAGTTAAGGTTCACTTTGAAATGCTT
TGTCATTCTCAAGACTTTCACCCACGAAATGTGGTTTAATGATACAGATC
ATATCTTTTAGCACCTTGTGAATCCACTCATACAGACTTTTATTACCCAA
CTCTATTTGTTTTTCCTCTACTTCGTCCTAGGATCACGACCCCGTTTTTC
TTTCCTTATTATGATCCATTTTATTGAATGTTATACTTCCTTTCCACGGC

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCCCAGGGTTTCTATCTCTAG
CATTGCCTCATTTTGCGTTTTCTTTATTGTGTCTACTTCCCTTTTTAATT
CTAGTATGGTTTTGTTCATTTCCATCACCTGTTTGGATGTGTTTTCCTGT
TTTTCTTTAAGGACTTATATGTGTTTGGTTGTGTTTTCCTGTTTTTCTTT
ATGGACTTGTAACTCTTTAGCAGTTTTCTCCTGTATTTCTTTAAGTGAGT
TATTAAAGTTCTTCTTGATGTCCTCTACCCTCATCATGATATGCTTTTAA
ATCCGGGTCTAGCTTATCGGGTGTGTTGGGGTGCCCAGGACTGGATGAGG
TGGGAGTTCTGCGTTCTGATGATGGTGAATGGTCTTGGCTTCTGTTAGTA
AGATTCTTATGTTTGCCTCGTGCCATCTGGTAATCTCTGGAGTCAGTTGT
TATAGTTGTCTCTGGTTAGTTAGAGCTTGTTCCTCTTGTGATTCTGTTAG
TCTCTATCAACAGACCTGGGAGACTAGCTGTCTTCTGAGTTTCAGTGTGC
AGAGCACTCTCTGTATGCCAGCTCTCCTCTTGCAGGTAAGGTTTCTAGAC
ACCTGGTTTTTGAATTTCTTCTTGGCAAAAATTGTGTTTCCCTCCCACAA
GTTCTTAAATTTCCCGCAATACGTTCTGGGCACCCTGGTGATTCCTCAAA
ATTTGTGTCC

Query= MSMg01no361_b11.b1 MSMg01no361_b11.b1 CHROMAT_FILE:
MSMg01no361_b11.b1 PHD_FILE: MSMg01no361_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:01 2005
         (415 letters)



>mm_chr12_11787612_11788426
          Length = 815

 Score =  745 bits (385), Expect = 0.0
 Identities = 403/411 (98%), Gaps = 4/411 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactaatttactcacttggtaagtgggcagtaagcacctatagttacaggcattc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcactaatttactcacttggtaagtgggcagtaagcacctatagttacaggcattc 358

                                                                       
Query: 65  aaaaaggattgtcttaccaagatagagactcttactttggtacaaaagatgcatcaacac 124
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 357 aaaaaggattgtcttaccaagatagagactcttactttggtacagaagatgcatcaacaa 298

                                                                       
Query: 125 tgtaagactaactgttggtattgttcatcaaaagcctaggctagtttagtagccaagctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgtaagactaactgttggtattgttcatcaaaagcctaggctagtttagtagccaagctt 238

                                                                       
Query: 185 tgagcttaaaataggtgggagaactgactcacactttcctccctccctccctccctccct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 237 tgagcttaaaataggtgggagaactgactcacactttcctccctccctccctccctcc-- 180

                                                                       
Query: 245 ccttccctccctccctcctttctcctttccttcctgccttccttcctctcctccttcctt 304
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 179 --ttccctccctccctcctttctcctttccttcctgccttccttcctctcttccttcctt 122

                                                                       
Query: 305 ccttcctttttctctctcttttgtcatttcttatttcctttccacaaaataagaaaaata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccttcctttttctctctcttttgtcatttcttatttcctttccacaaaataagaaaaata 62

                                                              
Query: 365 tcaaaatgctcattttccccaggatcagtaatttctagatggcctccaggc 415
           |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 61  tcaaaatgctcattttccccagtatcagtaatttctagatggcctccaggc 11


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space:   327236
Effective search space used:   327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)