Query= MSMg01no362_b06.b1 MSMg01no362_b06.b1 CHROMAT_FILE:
MSMg01no362_b06.b1 PHD_FILE: MSMg01no362_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:18 2005
(359 letters)
>mm_chr12_79432706_79433463
Length = 758
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%), Gaps = 1/355 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaattttaaaaattacatggagaggaacaattgtggggcttgtatccagtctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaattttaaaaattacatggagaggaacaattgtggggcttgtatccagtctg 264
Query: 65 gagcaaacagccaaaggagagagaaaaataacccctgctcttggtatcaatactatctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagcaaacagccaaaggagagagaaaaataacccctgctcttggtatcaatactatctct 324
Query: 125 gtacattatgttatttgctgttccccaacattgcagccattctatttctgttactgttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtacattatgttatttgctgttccccaacattgcagccattctatttctgttactgttat 384
Query: 185 tactgatatatgcatgtgaagtagtttgttttagtgtgaggaaaatctaatttaactctt 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactgatatatgcatgtgaattagtttgttttagtgtgaggaaaatctaatttaactctt 444
Query: 245 ggatttctaataagtttcttattcatttaaatttgtaaataaagcccttgaacttattct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 445 ggatttctaataagtttcttattcatttaaatttgtaaataaagcccttgaacgtattct 504
Query: 305 gtgtagtgtacggagttcctaagtgtttgagcttgtttcatgaacagtttcagat 359
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 gtgtagtgtacggacttcctaagtgtttgagcttgtttcatgaacagtt-cagat 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 758
Length adjustment: 9
Effective length of query: 350
Effective length of database: 749
Effective search space: 262150
Effective search space used: 262150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_b06.g1 MSMg01no362_b06.g1 CHROMAT_FILE:
MSMg01no362_b06.g1 PHD_FILE: MSMg01no362_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:19 2005
(380 letters)
>mm_chr12_79559339_79560119
Length = 781
Score = 625 bits (323), Expect = 0.0
Identities = 326/327 (99%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 1 tctgaa-acaccatgtgccatttaccaaaccatttgtagaaatcaacacacaagtaactg 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctgaacacaccatgtgccatttaccaaaccatttgtagaaatcaacacacaagtaactg 268
Query: 60 tgatcagaatcagaaaggtaccaacactctaatcatggctgttattgaaacattcttaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgatcagaatcagaaaggtaccaacactctaatcatggctgttattgaaacattcttaag 208
Query: 120 aaggcatggtccctccctccctccccacttgtgattgctttcttctctctccaaagtggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 aaggcatggtccctccctccctccccacttgtgattgctttcttctctctccaaagtggg 148
Query: 180 actgaggtgtcctcactttagcgctttagcttgttgacctttttgagttctgtggactgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 actgaggtgtcctcactttagcgctttagcttgttgacctttttgagttctgtggactgc 88
Query: 240 atcttgtgtattctgtaattttttttgggctaatatccacttattagtgagcacatacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atcttgtgtattctgtaattttttttgggctaatatccacttattagtgagcacatacca 28
Query: 300 tgcatgtccttttgggtctgagttacc 326
|||||||||||||||||||||||||||
Sbjct: 27 tgcatgtccttttgggtctgagttacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 781
Length adjustment: 9
Effective length of query: 371
Effective length of database: 772
Effective search space: 286412
Effective search space used: 286412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
