Query= MSMg01no362_m03.b1 MSMg01no362_m03.b1 CHROMAT_FILE:
MSMg01no362_m03.b1 PHD_FILE: MSMg01no362_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:14 2005
(384 letters)
>mm_chr12_57785998_57786782
Length = 785
Score = 706 bits (365), Expect = 0.0
Identities = 380/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Minus
Query: 1 aatgacacacacttggatgacactacataaaagtgcatttcctcccatcttctgggaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aatgacacacacttggatgacactacataaaagtgcatttcctcccatcttctgggaaag 526
Query: 61 tttcttgtgtcaataaaatgatgagggcaaagttatacagtctggacaagtcaccagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tttcttgtgtcaataaaatgatgagggcaaagttatacagtctggacaagtcaccagaac 466
Query: 121 ccaaggtataatttgaagtcccataactctaccacccagctgtcataaaaattacaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccaaggtataatttgaagtcccataactctaccacccagctgtcataaaaattacaaaca 406
Query: 181 aatgtatttgtaaggcatactgaaaacatatttctcatcattgaccgaaactttaattaa 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 405 aatgtatttgtaaggcatactgaaaacatatttctcatcattgactgaaactttaattaa 346
Query: 241 ctaatcatccagattggcaaatgaaaatacttgaaaaaaaaa-cacaacaacagtatctc 299
||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 345 ctaatcatccagaaaggcaaatgaaaatacttgaaaaaaaaaacacaacaacagtatctc 286
Query: 300 agaacagaatataagcagctgaagtgtgtgccttgctgtgctttacaatctctttaaaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agaacagaatataagcagctgaagtgtgtgccttgctgtgctttacaatctctttaaaac 226
Query: 360 tgagaagtgttttacgaattccttt 384
|||||||||||||| ||||||||||
Sbjct: 225 tgagaagtgttttaggaattccttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 785
Length adjustment: 9
Effective length of query: 375
Effective length of database: 776
Effective search space: 291000
Effective search space used: 291000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_m03.g1 MSMg01no362_m03.g1 CHROMAT_FILE:
MSMg01no362_m03.g1 PHD_FILE: MSMg01no362_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:14 2005
(225 letters)
>mm_chr12_57561090_57561716
Length = 627
Score = 377 bits (195), Expect = e-109
Identities = 218/227 (96%), Gaps = 4/227 (1%)
Strand = Plus / Plus
Query: 1 cacttgttttggaagtaaaatttaggttgacttataaaggtcaacttggaatcataatag 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgttttggaagtaaaatttaggtggacttataaaggtcaacttggaatcataatag 260
Query: 61 gaatgcctgtagttttcatagttaatttagaagagaaataatgaagtcagtttgtgtcca 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatgcctgtagtttttatagttaatttagaagagaaataatgaagtcagtttgtgtcca 320
Query: 121 ttttgtttggaaattgttctggaaagtaaattat--gttcacaagatcaactcttcttca 178
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ttttgtttggaaattgttctggaaagtaaattatatgttcacaagatcaactcttcttcc 380
Query: 179 gtccaagttttttggtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 225
|||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 381 gtccaagtattt--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 627
Length adjustment: 9
Effective length of query: 216
Effective length of database: 618
Effective search space: 133488
Effective search space used: 133488
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
