Query= MSMg01no363_i21.b1 MSMg01no363_i21.b1 CHROMAT_FILE:
MSMg01no363_i21.b1 PHD_FILE: MSMg01no363_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:18 2005
(338 letters)
>mm_chr12_25829904_25830641
Length = 738
Score = 634 bits (328), Expect = 0.0
Identities = 331/332 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcttaacctcacgccagcacctgtcatctttatggcttttgcatgggcccaga 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttaacctcaggccagcacctgtcatctttatggcttttgcatgggcccaga 263
Query: 64 tgggggtaggggagggagtgtcttctacaacagttatttttctctctgaagctgcataca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgggggtaggggagggagtgtcttctacaacagttatttttctctctgaagctgcataca 323
Query: 124 aaagtgtcctatcaagagggaattctgggtagtgttgcttctaggggagactattaagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagtgtcctatcaagagggaattctgggtagtgttgcttctaggggagactattaagag 383
Query: 184 gattttttaccttgatctttcctgcagagatatccatcttcctaggtcaaagggcagcta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattttttaccttgatctttcctgcagagatatccatcttcctaggtcaaagggcagcta 443
Query: 244 aacagaaacaacgaagcctcaggtagccttgtgacagtttccactcgggacattaacctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacagaaacaacgaagcctcaggtagccttgtgacagtttccactcgggacattaacctc 503
Query: 304 atcagcaggtaggagtgggggtgggggtgagg 335
||||||||||||||||||||||||||||||||
Sbjct: 504 atcagcaggtaggagtgggggtgggggtgagg 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_i21.g1 MSMg01no363_i21.g1 CHROMAT_FILE:
MSMg01no363_i21.g1 PHD_FILE: MSMg01no363_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:18 2005
(516 letters)
>mm_chr12_25860367_25861283
Length = 917
Score = 984 bits (509), Expect = 0.0
Identities = 515/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Minus
Query: 1 tttctggcc-caggtaggctgtgctgtgaccctttcacaggaccatcttctaaaccacat 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tttctggccacaggtaggctgtgctgtgaccctttcacaggaccatcttctaaaccacat 658
Query: 60 ttgtccacatacagtcgggggctttgtggcctgttgagtccagatctgtgagatagaaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ttgtccacatacagtcgggggctttgtggcctgttgagtccagatctgtgagatagaaat 598
Query: 120 aacctgatgcaacttcacacagactaatgcaaggcagctggccagggcgtgactacagtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aacctgatgcaacttcacacagactaatgcaaggcagctggccagggcgtgactacagtg 538
Query: 180 tagcaggtagcccaactctagtgtgaacagccagctatcaggaaatgcatgggtgcctgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tagcaggtagcccaactctagtgtgaacagccagctatcaggaaatgcatgggtgcctgg 478
Query: 240 accatatcccaagtgctagcaggttctctatggctgacagctctacctaaggcatcaggg 299
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 accatagcccaagtgctagcaggttctctatggctgacagctctacctaaggcatcaggg 418
Query: 300 tactccatacaaccctgcagcaagtgtcccaaagagatcaagagctctgtcgccagggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tactccatacaaccctgcagcaagtgtcccaaagagatcaagagctctgtcgccagggag 358
Query: 360 tggggcttcttcagggagattctgcactctctctgtggacctttacatctataaccaggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tggggcttcttcagggagattctgcactctctctgtggacctttacatctataaccaggg 298
Query: 420 acccagtggccagtagaacaagcccagctttgccctgggacctatcaaagagcagactca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 acccagtggccagtagaacaagcccagctttgccctgggacctatcaaagagcagactca 238
Query: 480 ccccacctgctgcagggatagggcagacatagctcag 516
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 ccccacctgctgcagggatagggcagacatagctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 917
Length adjustment: 10
Effective length of query: 506
Effective length of database: 907
Effective search space: 458942
Effective search space used: 458942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
