Query= MSMg01no363_p07.b1 MSMg01no363_p07.b1 CHROMAT_FILE:
MSMg01no363_p07.b1 PHD_FILE: MSMg01no363_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:51 2005
(253 letters)
>mm_chr12_84653105_84653757
Length = 653
Score = 489 bits (253), Expect = e-143
Identities = 253/253 (100%)
Strand = Plus / Plus
Query: 1 cttgtgagcattacatgagatgatgtgtgaaaactgccaggcacctaatagattttccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgtgagcattacatgagatgatgtgtgaaaactgccaggcacctaatagattttccat 260
Query: 61 cattcccttccctctcgcctcgcctgcgtgcaaaaccacttcattcctagtgaaacggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattcccttccctctcgcctcgcctgcgtgcaaaaccacttcattcctagtgaaacggga 320
Query: 121 ggaaaatcaaagccctaaataaataagctttcccaagaaacagagataaactcacgaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaatcaaagccctaaataaataagctttcccaagaaacagagataaactcacgaagc 380
Query: 181 cacgttcatgccacatccacaggaatgtcacctggtcctcgtgtgcctctgggcaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacgttcatgccacatccacaggaatgtcacctggtcctcgtgtgcctctgggcaagaca 440
Query: 241 gcacctgccttat 253
|||||||||||||
Sbjct: 441 gcacctgccttat 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no363_p07.g1 MSMg01no363_p07.g1 CHROMAT_FILE:
MSMg01no363_p07.g1 PHD_FILE: MSMg01no363_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:51 2005
(473 letters)
>mm_chr12_84738227_84739100
Length = 874
Score = 884 bits (457), Expect = 0.0
Identities = 470/475 (98%), Gaps = 3/475 (0%)
Strand = Plus / Minus
Query: 1 atggtggatggagagaagccacttaggcatgttgtcttctgacttccatgtgcataaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atggtggatggagagaagccacttaggcatgttgtcttctgacttccatgtgcataaaca 423
Query: 61 taaaaaaaaaagt--aaaaaaaaaaaagacctataaataaccaaagtgtctcaatagaat 118
| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 422 t-aaaaaaaaagtaaaaaaaaaaaaaagacctataaacaaccaaagtgtctcaatagaat 364
Query: 119 tttgcaatgtagcctaattcctgccttccaaagtacacgctattctttaatttacatcat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgcaatgtagcctaattcctgccttccaaagtacacgctattctttaatttacatcat 304
Query: 179 tattgatgccatgaagattcatgagatacttatgtaactatcacacgggaagccttttct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tattgatgccatgaagattcatgagatacttatgtaactatcacacgggaagccttttct 244
Query: 239 tggcagttgagtatataaagatgaagggaaactgatccctgcctgtatctgttttgcaac 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tggcagttgagtatataaagatgaagggaaactgatccctgcctgtatctgttttgcaac 184
Query: 299 ttaccaaaataccccaagaagagtggcttcagttggaggctaatcaaccatttaccttgc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttaccaaaataccccaagaagagtggcttcagttggaggctaatcaaccatttaccttgc 124
Query: 359 taactgttccgtgggctagtgattggactgggctcagctgggtggttcttcccgtctagt 418
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 123 taactgttccgtgggctagtgattggactgggctcagccgggtggttcttcccgtctagt 64
Query: 419 ctaggcacgcttaggtctgtaggcagctggtcttgggcagattgtgggctgcttg 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctaggcacgcttaggtctgtaggcagctggtcttgggcagattgtgggctgcttg 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 874
Length adjustment: 10
Effective length of query: 463
Effective length of database: 864
Effective search space: 400032
Effective search space used: 400032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
