Query= MSMg01no364_o02.b1 MSMg01no364_o02.b1 CHROMAT_FILE:
MSMg01no364_o02.b1 PHD_FILE: MSMg01no364_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:10 2005
(244 letters)
>mm_chr12_78587384_78588027
Length = 644
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Plus
Query: 1 attttgccagcattttctttaggcctctgacaaaactataatgacatccttcccatacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgccagcattttctttaggcctctgacaaaactataatgacatccttcccatacca 260
Query: 61 cccccaaccaaattagttactagagaacagtaaagtagtctttgaagtcaggatagattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccccaaccaaattagttactagagaacagtaaagtagtctttgaagtcaggatagattc 320
Query: 121 cctacattaagcccgttcaccactgtgatggtggtagttgtaggtgtctctcctctcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctacattaagcccgttcaccactgtgatggtggtagttgtaggtgtctctcctctcgac 380
Query: 181 ttcaggctccaacattcatctttttctcccatgggtctggtctatcacaggtgttccctg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaggctccaacgttcatctttttctcccatgggtctggtctatcacaggtgttccctg 440
Query: 241 cag 243
|||
Sbjct: 441 cag 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no364_o02.g1 MSMg01no364_o02.g1 CHROMAT_FILE:
MSMg01no364_o02.g1 PHD_FILE: MSMg01no364_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:10 2005
(525 letters)
>mm_chr12_78673729_78674652
Length = 924
Score = 951 bits (492), Expect = 0.0
Identities = 516/524 (98%), Gaps = 3/524 (0%)
Strand = Plus / Minus
Query: 1 attaaggtagcttaactcaaatactgaacgggggcttgtcagttcagtaagacatgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 attaaggtagcttaactcaaatactgaacgggggcttgtcagttcagtaagacatgcagg 663
Query: 61 caggacctaagacattttgcatgtctgtggctctgggaacattcaggtttgagggtcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caggacctaagacattttgcatgtctgtggctctgggaacattcaggtttgagggtcggc 603
Query: 121 ctgggtgggtcattcattttcaaccatcaacccaaagaactgctgtaggaagaggtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctgggtgggtcattcattttcaaccatcaacccaaagaactgctgtaggaagaggtcaaa 543
Query: 181 cgg-actcgtttttactttagtgacactgcctggtcatctgtcaggaacaaggcaagctc 239
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 -ggaactcgtttttactttagtgacactgcctggtcatctgtcaggaacaaggcaagctc 484
Query: 240 tggaagtctctttctttttctattgtctaggatgaaggccaactttggaacattaagaga 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tggaaatctctttctttttctattgtctaggatgaaggccaactttggaacattaagaga 424
Query: 300 aaaagcacgttgaactcctggattcgggaggggcacccccaagtgcacttgcagggccat 359
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaagcacgtagaactcctgggttcgggaggggcacccccaagtgcacttgcagggccat 364
Query: 360 gtctctgtgcctgactctgcatatcaacaaaaccccagtgtccttggggatcgacaactg 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtctctgtgcctgactctgcataccaacaaaaccccagtgtccttggggatcgacaactg 304
Query: 420 atttttgtcaactggtgactgagtttcaggtcttgtcctgaacctgattaattaggggat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atttttgtcaactggtgactgagtttcaggtcttgtcctgaacctgattaattaggggat 244
Query: 480 ggagcatcgggccagagtatactataattcaccagagactgtta 523
||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 243 ggagcatcgggtcagagtatactataat-caccagagactgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 924
Length adjustment: 10
Effective length of query: 515
Effective length of database: 914
Effective search space: 470710
Effective search space used: 470710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|