AATTTGCGGTCGGAATACGACTACTATTCCGAGAGGATCCGCGGAATTCA
GATTACATGTTGAGTATTGCCCTCTGTCCCTCTCCATTTGTTCCTTTGAG
GCAAGACTTGTCCCTGAATCTTGGGCTCCTGCTTTCATGGCTAAGCTGGA
AACCAGCAAACTCCATGGATCTCCCAGTTTCCACCTCCCATCCCATCCCG
CTGCCCCAACTCAACCCAACCCCAACCCCTGTCCAGAGCTGAGGTTCCAG
GCTGTAGTGGGACACCTGGCTTGTTATATTGTAGGTGTTGTTATCCAAAC
TGTAACCCTTATAGTTTACACAGTAGGCGTTTTAACTGTTGAGTCATTTC
TCTAGCTCTGGCCATCGGCCATTTTTTTTTTTACAGCATAACCATGATAG
TCGCTACGAAAACGAGATTTACAGTTTGAGCTTAGTTGCCGACTATGTAT
GGTCATTATTGAGCAAGTGAGCTGCACAGCACCCTCACAAGCTGCGGAAA
GGTGAGTTCTGCAATGTCTGATCCCTTACTCTCTTACGATGTTAATTTCC
ACGTCCTCACAACCCTAATTCCTCCCCTTTAAGGTTTGCTGCCCCCTTTC
ATCCAATCATTTCTCCCCTTTCCCACTCAACTTTTTCTTTTTAACTTCTC
GTACTCCATTCAAACACCGCCCCCTTTCTTTTCCCCGCTCTTTTTTCCTA
TTTTCCCCCTTTTTCTTTCCCCTTTTTTTTCCCTCCTCTCTATATCCCAA
CATTTTCTTTTCCCCG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGACAAAAAGCACTTGAGTTAGC
ATCTGTGGCTGTCCCTGGGTAAACTCCACACAGATCAAAACTCTGTGCCT
TGTGGAATTCCAGTCATAGAGATCCGCAGTCAGTGCTCTGTGTCCCATGA
CCAGGAGTCACCGATCCTTTGCAGACAGTGACAATAAACACATCAAGCAA
TTTCTCTTCCTTAGGCTACCACCAATCTCAGCCTTGAATGTGTGCTTAAG
TAGATTATGTGTGAATAGTTTTACAACTTGGAGGAAGGACACCTCGAGGA
AGCCAAGCAAGCAATCTTTCCAACCAGATCCACTTGCATGGTGACCATAA
ACACACACACCACACACACTCAAATAAACTGAAGGGCATTTGATTGACCT
CTACAGGGGGAGGGGGCTGGGAGAAGTTCCAGCACACCACAGGAGCACCT
GTTGGGTGGAACGCAGGCCTCCAGCCATGTTAAACTGAAGGTATGACTTA
AAAACAAAGCATGCCACGTGTGGTGCATGCCTTATATCCCAGCACTCTGG
NAGGGAGAAGCAGGTGGATCTCTGTGAATTCAAAGCAGCCTGGGCTAATT
ATGAGCTGTTGATCCCCGGGGGGAGGGCCTCTACCATCTGGGGAAAATGG
GCAGGGAACTTGGGAAAACTCCCTTCTTTCTGCGGGCTAAAAAAAATGTT
TTAG

Query= MSMg01no365_m09.b1 MSMg01no365_m09.b1 CHROMAT_FILE:
MSMg01no365_m09.b1 PHD_FILE: MSMg01no365_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:22 2005
         (343 letters)



>mm_chr12_25652381_25653123
          Length = 743

 Score =  646 bits (334), Expect = 0.0
 Identities = 337/338 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgagtattgccctctgtccctctccatttgttcctttgaggcaagacttgtccctgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagtattgccctctgtccctctccatttgttcctttgaggcaagacttgtccctgaat 260

                                                                       
Query: 61  cttgggctcctgctttcatggctaagctggaaaccagcaaactccatggatctcccagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgggctcctgctttcatggctaagctggaaaccagcaaactccatggatctcccagtt 320

                                                                       
Query: 121 tccacctcccatcccatcccgctgccccaactcaacccaaccccaacccctgtccagagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccacctcccatcccatcccgctgccccaactcaacccaaccccaacccctgtccagagc 380

                                                                       
Query: 181 tgaggttccaggctgtagtgggacacctggcttgttatattgtaggtgttgttatccaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaggttccaggctgtagtgggacacctggcttgttatattgtaggtgttgttatccaaa 440

                                                                       
Query: 241 ctgtaacccttatagtttacacagtaggcgttttaactgttgagtcatttctctagctct 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtaacccttacagtttacacagtaggcgttttaactgttgagtcatttctctagctct 500

                                                 
Query: 301 ggccatcggccatttttttttttacagcataaccatga 338
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggccatcggccatttttttttttacagcataaccatga 538


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space:   245156
Effective search space used:   245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no365_m09.g1 MSMg01no365_m09.g1 CHROMAT_FILE:
MSMg01no365_m09.g1 PHD_FILE: MSMg01no365_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:22 2005
         (440 letters)



>mm_chr12_25829468_25830307
          Length = 840

 Score =  851 bits (440), Expect = 0.0
 Identities = 440/440 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagacaaaaagcacttgagttagcatctgtggctgtccctgggtaaactccacacagatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cagacaaaaagcacttgagttagcatctgtggctgtccctgggtaaactccacacagatc 581

                                                                       
Query: 61  aaaactctgtgccttgtggaattccagtcatagagatccgcagtcagtgctctgtgtccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aaaactctgtgccttgtggaattccagtcatagagatccgcagtcagtgctctgtgtccc 521

                                                                       
Query: 121 atgaccaggagtcaccgatcctttgcagacagtgacaataaacacatcaagcaatttctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 atgaccaggagtcaccgatcctttgcagacagtgacaataaacacatcaagcaatttctc 461

                                                                       
Query: 181 ttccttaggctaccaccaatctcagccttgaatgtgtgcttaagtagattatgtgtgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttccttaggctaccaccaatctcagccttgaatgtgtgcttaagtagattatgtgtgaat 401

                                                                       
Query: 241 agttttacaacttggaggaaggacacctcgaggaagccaagcaagcaatctttccaacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agttttacaacttggaggaaggacacctcgaggaagccaagcaagcaatctttccaacca 341

                                                                       
Query: 301 gatccacttgcatggtgaccataaacacacacaccacacacactcaaataaactgaaggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gatccacttgcatggtgaccataaacacacacaccacacacactcaaataaactgaaggg 281

                                                                       
Query: 361 catttgattgacctctacagggggagggggctgggagaagttccagcacaccacaggagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 catttgattgacctctacagggggagggggctgggagaagttccagcacaccacaggagc 221

                               
Query: 421 acctgttgggtggaacgcag 440
           ||||||||||||||||||||
Sbjct: 220 acctgttgggtggaacgcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)