Query= MSMg01no365_n13.b1 MSMg01no365_n13.b1 CHROMAT_FILE:
MSMg01no365_n13.b1 PHD_FILE: MSMg01no365_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:27 2005
(569 letters)
>mm_chr12_78886861_78887828
Length = 968
Score = 1031 bits (533), Expect = 0.0
Identities = 562/575 (97%), Gaps = 7/575 (1%)
Strand = Plus / Plus
Query: 1 tcaataaatgttagtcagtatgactacacttaagattccctaacaaaagcctccatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaataaatgttagtcagtatgactacacttaagattccctaacaaaagcctccatgcat 260
Query: 61 gagtgtaagcatagtccttaaaatacgaactgacatgaacagcccctaatgttacatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtgtaagcatagtccttaaaatacgaactgacatgaacagcccctaatgttacatcct 320
Query: 121 tagatcatgtcttatgtatgtaggtcaaccagtatgtgttaatggtttcttccttagaga 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tagatcatgtcttatgtatgtaggtcaaccagtatgtgttaatgctttcttccttagaga 380
Query: 181 accgagcagcgtcaaccttgttataacaacaggaatctgtgaattaatgctctttccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accgagcagcgtcaaccttgttataacaacaggaatctgtgaattaatgctctttccaca 440
Query: 241 gatccaatgttatccacgtggcattgcctaaaacacagccacatctcaacatacatagtc 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gatccaatgttatccacgtggcattgactaaaacacagccacatctcaacatacatagtc 500
Query: 301 ttttccaagttcattccatccttttatttattcaaccaatattaaccatagacacaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttccaagttcattccatccttttatttattcaaccaatattaaccatagacacaaagg 560
Query: 361 tgtctctcctaaaaggatttagagacaatgactatagggaattaactggaattaaatgaa 420
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 561 cgtctctcctaaaaggatttagagaca-tgactataggaaattaactggaattaaatgag 619
Query: 421 g------ccctgattcattaagactgtagggttaatctgtctgtctgtctgtctgttcat 474
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtgggaccctgattcattaagactgtagggttaatctgtctgtctgtctgtctgttcat 679
Query: 475 ttatttactttttattgactatttgggattctcacatcacatatttaatcacacctatct 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttatttactttttattgactatttgggattctcacatcacatatttaatcacacctatct 739
Query: 535 cctagcccacccatgtctgtcctgcctctcctgag 569
||||| |||||||||||||||||||||||||||||
Sbjct: 740 cctagtccacccatgtctgtcctgcctctcctgag 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space: 535522
Effective search space used: 535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_n13.g1 MSMg01no365_n13.g1 CHROMAT_FILE:
MSMg01no365_n13.g1 PHD_FILE: MSMg01no365_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:27 2005
(458 letters)
>mm_chr12_79044890_79045747
Length = 858
Score = 886 bits (458), Expect = 0.0
Identities = 458/458 (100%)
Strand = Plus / Minus
Query: 1 aggaggtagaggcactagggggagctagaaggagtgatagataagatcaatgaacactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aggaggtagaggcactagggggagctagaaggagtgatagataagatcaatgaacactct 704
Query: 61 ataagtgtatgaggcttttgagacattaaaatattattaaaatatgtgcttataaaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ataagtgtatgaggcttttgagacattaaaatattattaaaatatgtgcttataaaccat 644
Query: 121 aataaaagttataaagtactgctgtactagctgtatactggacagtgtgaggtacaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 aataaaagttataaagtactgctgtactagctgtatactggacagtgtgaggtacaaagt 584
Query: 181 atgtatttaaaaatatttgatttcagagaagacagatttgcattaacaataaaacaaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 atgtatttaaaaatatttgatttcagagaagacagatttgcattaacaataaaacaaaac 524
Query: 241 aaaaacaattttccccactcctgtgtgtctgaaatgaaatggaatgcagctgaaagaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aaaaacaattttccccactcctgtgtgtctgaaatgaaatggaatgcagctgaaagaaat 464
Query: 301 taagtccggtttcacattttctactgagatacgtttaattttgtgagcttcatgtggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 taagtccggtttcacattttctactgagatacgtttaattttgtgagcttcatgtggctt 404
Query: 361 agagcgatatttgtatggcctgtgcttactagctgtcaacaacatgtgagaaagctgtcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 agagcgatatttgtatggcctgtgcttactagctgtcaacaacatgtgagaaagctgtcg 344
Query: 421 acacgcagctcactgctcccttgcacacaccctaagac 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 343 acacgcagctcactgctcccttgcacacaccctaagac 306
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
