NNGGCTCTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAATCCG
CGGAATCCAGGAGTCTACGACTTGGGATTTTGAGCTGGATTTGATGGGAT
TTTGAAGATGTGAGTCTTCAAGTCTGAAAGCCTGAGGAGAAAGTGCTGGC
TGATAGTGAAGTCTCTCAGTCAGGACTCCTGGCTCAAAGCCCTTTAGAGA
AAAGCCAATGTTGTGGCAGTGCACAGAGGATAAGATGTAAGGCATAAACC
AGCACTGGTGCCAAGCCTAGGAAACCCAGAGCAAATACTGATGACTCAAC
TAAGATCACATTGTGCACCAAGCACTGTTTTCTTGACAGACCAGAGATTG
TCCTCAGCATAGAGAATATCAACGCATGGAAAGGTAACTAGCCACAAGGC
CTAGCCCCATGAGACTCACCCTCTGGAGGCTGTAAAAGATGCTCTGTATT
CTACAGCAGCAGGGTACCCTGTGCTTCAAATCCACTTTCAATGAAGTGTA
TTTGGGCATCTTCGTTCCGCCTGTTCCTATTTTCCCCCCCCCTATTCTTT
TTTTTCCTTTTTCCTTTTTCTCCCCCTATCTTTTTTTTTCCCCGCTTTTT
CTTTTTCTCCCTTTCCCTTCCTCACTTCCTTTCCTTTTCCTTCTTTTTAT
TCATCCTTACCTTTTTATTTCACTTTTTTATTTCTTTTTTTTCCTCCCCC
TTTCGTTCTTTCCCGTATATCCTATTCCCCCCCCCTCCTTTTTCTTCCCC
TTTTATTTTTTTATTTCCCTCCTCTAATTTCCCCCTTCCCACCATCTTTT
TTCCTCCCCTCTTAGTACTTTTTCCCC

NNCCAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTCTGCAATTCAGAGATCATCTGTCTCTACCTTCT
GAGTGCTGGGATGTACGCCACACTCTTGGCTTGTAGTGTTCCTTTTGAAA
TGTGGAACAGAAGAGTCCTTGTTTTTAGATTGTCAATTCCATAACAACAT
TTACAGGGCCACCACTGTTGGTGTTCAGGCTCCCGCTTACAGGTGACTTG
ACCAAGTCTATGTTTTTAACTTCCATACCTGTGACAACAACCCCTTCCTC
TTCTTATGCAGTTGTGTCTATTTTCCTGTATTGTTGGAAGTACTTTCACT
TTGTTTCTCAGCAGTTGCCAGCTATGTGTGCTGAGATAAGTCTTCTGTGT
TGGCTCCTACAAAACTGGGCAGGCCTCTGTAGCTGGGCTCCTGCGCACTT
CAGGCTTTGGGGTGAGCAGAGGGTGTTCGTAGATTTCCCCAGGACCGCCT
CTAGCGNTCCCCGAGATCTGNGGAACCCCTTTGGGATGGCCCCTTCCTTC
CCTTCTGTCACCCCCGGTTTCCTTGCTGATGTCAGCTGCCACTGCCACCT
GTTTTTGGGCGGGTGTTCGCTTACTCTCCTAGTTCCTGTTATTTTCACTT
TTATGTTTCTTTCTCCATTCCTCTTTCTCCCCGTTTTTTTCCCCCTTTTC
ATAAATTACCCCTCCCGCCTTTCCCCTTTTTTTTTTGCTACCCCTAATTC
CACAATAATATTTTTTTCTCTCTTACCCCCTCCCCTG

Query= MSMg01no366_i23.b1 MSMg01no366_i23.b1 CHROMAT_FILE:
MSMg01no366_i23.b1 PHD_FILE: MSMg01no366_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:26 2005
         (250 letters)



>mm_chr12_81286004_81286653
          Length = 650

 Score =  468 bits (242), Expect = e-136
 Identities = 248/250 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gattttgagctggatttgatgggattttgaagatgtgagtcttcaagtctgaaagcctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattttgagctggatttgatgggattttgaagatgtgagtcttcaagtctgaaagcctga 260

                                                                       
Query: 61  ggagaaagtgctggctgatagtgaagtctctcagtcaggactcctggctcaaagcccttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagaaagtgctggctgatagtgaagtctctcagtcaggactcctggctcaaagcccttt 320

                                                                       
Query: 121 agagaaaagccaatgttgtggcagtgcacagaggataagatgtaaggcataaaccagcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagaaaagccaatgttgtggcagtgcacagaggataagatgtaaggcataaaccagcac 380

                                                                       
Query: 181 tggtgccaagcctaggaaacccagagcaaatactgatgactcaactaagatcacattgtg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 381 tggtgccaagcctaggaaacccagagcaaatactgatgactcaactaagatcacaccgtg 440

                     
Query: 241 caccaagcac 250
           ||||||||||
Sbjct: 441 caccaagcac 450


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space:   154481
Effective search space used:   154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no366_i23.g1 MSMg01no366_i23.g1 CHROMAT_FILE:
MSMg01no366_i23.g1 PHD_FILE: MSMg01no366_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:26 2005
         (249 letters)



>mm_chr12_81512063_81512711
          Length = 649

 Score =  443 bits (229), Expect = e-129
 Identities = 244/249 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagatcatctgtctctaccttctgagtgctgggatgtacgccacactcttggcttgtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agagatcatctgtctctaccttctgagtgctgggatgtacgccacactcttggcttgtag 445

                                                                       
Query: 61  tgttccttttgaaatgtggaacagaagagtccttgtttttagattgtcaattccataaca 120
           || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 444 tgctccttttgaaatgtggaacagaagagtccttgtttttagattgtcagttccataaca 385

                                                                       
Query: 121 acatttacagggccaccactgttggtgttcaggctcccgcttacaggtgacttgaccaag 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 acatttacagggccaccactgttggtgttcaggctcccacttacaggtgacttgaccaag 325

                                                                       
Query: 181 tctatgtttttaacttccatacctgtgacaacaaccccttcctcttcttatgcagttgtg 240
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 324 tctatgtttttaacttccatacctgtgacaacaaccccttcctcctcttatgcagttgcg 265

                    
Query: 241 tctattttc 249
           |||||||||
Sbjct: 264 tctattttc 256


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space:   153600
Effective search space used:   153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)