Query= MSMg01no366_j08.b1 MSMg01no366_j08.b1 CHROMAT_FILE:
MSMg01no366_j08.b1 PHD_FILE: MSMg01no366_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:28 2005
(451 letters)
>mm_chr12_62471058_62471908
Length = 851
Score = 816 bits (422), Expect = 0.0
Identities = 428/430 (99%)
Strand = Plus / Plus
Query: 22 tattttttaatatactttattttcaggccgatgaagaaaatgtcaagttttcccataccc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tattttttaatatactttattttcaggccgatgaagaaaatgtcaagttttcccataccc 281
Query: 82 aaactaaactattatccaactctcaaatatagctgtttattgtttgattcagttggcatg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaactaaactattatccaactctcaaatatagctgtttattgtttgattcagttggcatg 341
Query: 142 aatgtaaagtagtgagcctctttgcacccatcctacctatttgtctatatagaagaatca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aatgtaaagtagtgagcctctttgcacccatcctacctatttgtctatatagaagaatca 401
Query: 202 acatttagattgatggctgttttctcattggagacaatacaaattgtaaaatgctgtgga 261
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 402 acatttagattgatggctgttttctcattggagccaatacaaattgtaaaatgctgtgga 461
Query: 262 aattatgaataatcttgatcgttccaggtattaataaagaattcgcacatgttctggtat 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aattatgaataatcttgatcgttccaggtattaataaagaattcgcacatgttctggtat 521
Query: 322 tttctaagggaataactagtgtagataataaaatactttcagtaaactcattgcaaggat 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tttctaagggaataactagtgtagataataaaatactttcagtaaactcattgcaaggat 581
Query: 382 ttttaagatatggccaacattaacaaggtaggaagacagctattctgagaatcctcctct 441
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tttaaagatatggccaacattaacaaggtaggaagacagctattctgagaatcctcctct 641
Query: 442 cactccattt 451
||||||||||
Sbjct: 642 cactccattt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_j08.g1 MSMg01no366_j08.g1 CHROMAT_FILE:
MSMg01no366_j08.g1 PHD_FILE: MSMg01no366_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:28 2005
(244 letters)
>mm_chr12_62592409_62593050
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 acagtgtgcaggatttacttggaataatctttaaatatcaaaaagtttaattgaactatg 60
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 441 acagtgtgcaggatttacttggaataaactttaaa-atcaaaaagtttaattgaactatt 383
Query: 61 tactggcaatttttttattatggatttgcaatattttatctggatacaggtgtatgcttg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tactggcaa-ttttttattatggatttgcaatattttatctggatacaggtgtatgcttg 324
Query: 121 gtttttagttatactgattttattcactgtaagtttggtttttgataaatgattgcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtttttagttatactgattttattcactgtaagtttggtttttgataaatgattgcaaac 264
Query: 181 tgtagaaaaatactcattcttagatatatagtgtgagtctctaaattagggtgcttacat 240
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtagaaaaatattcattcttggatatatagtgtgagtctctaaattagggtgcttacat 204
Query: 241 tac 243
|||
Sbjct: 203 tac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 642
Length adjustment: 9
Effective length of query: 235
Effective length of database: 633
Effective search space: 148755
Effective search space used: 148755
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
