NCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAAATAGGATTGGAAGAAGCTAAAGTATTCTTATTTGCAAATAA
TATTATTTTATACATAAAAAGACTCTAACAACTCTACCAGGAAGCTTCTA
CTACAGATACAGATATCTTTAGCAGGACAAGAGAATACAAATGAATGTAC
AAAAGCTAGTAGCTTTCGCACATTCAAATGACAAACATACTAGAAAAGAA
ATCAAGGAAACAGTATCTTTCATAACAGCCTTAAAAAAAAATCTTGGAGT
AAGTCTAACCAAGCAAGTAATGATAATTTTTTTGGATGCTGTACTTGTGA
ATCTGAGATTCAGTTCTGCAGACTGGATGTTTCCCTAGGCTGAGTCTCAC
TGATCACTGAGCTCCACACGCAGGCTGCCTTCCCCCACCACCTCTCACCA
GCAGCTGCACAGATGTTGGCTGAACTGCTTCATGGACACCTGAATGCACC
CCTCAATTTTCCTCTTCACTCATTGAAGTGTGAAAGTTCATGGNCTGCAA
CTTTCCTGCCATAGATGTCCAAGTGGAAAACATTTCTTCCGTCCTGTCCA
GATGGTGCANGAGTTGTGAGTGCCCATGTGGCTATTTTTTTTTTCTGGGA
ATTTCGTTTGGGGGTTGTCTCTGAAGACAGGTCTTATAAGTTCAGTTGAC
CTCGACTCCCTATGAAGCCAAGAAAACCTGAGCCCTGGTCTTCCCCTTTC
C

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATCAGGTGCCACAGAAGAAAGTAGATGGA
AGCCTGATACATGGTAGATCTGCCTGTCCATGGTACCAGGAGACAGAGCT
CTCCCTGCTATGTACCAGACCCAGGCAGGCTGCTCTTTGATCTGAGAGAA
TTTGCAGCATTTTAGTGCTACATTTAATGCACCAAAGAATGCTGTTGGGA
TATCACAGACCCCTTAGGGCATGTGCAGGCTCACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACCTGTCTCTCTGTCT
CTGTTTCTGTTTCTCTCTGTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCCCTCTCTCTCTCTGGCTGGNTCTCTCTCTCTTTCTTT
CTCAAAAAGTAGACCTTGCCTACCCTGTAACTACAGTTTCTACCTCCCAT
AGGATGTAGCANGGTCTTGCAGTCCAATGTTCTTCATCATCTACCTCACT
GGGGAGCAAATGACTGATGAATTTTATACAGGGTCCCTGCCTCCCGGGGG
AAGGCCCCAAAGGGAAACAACTCCCTCCCCCCCGGTTTTCCTTCCCTTTT
CCCCTTTTCCCCCCCCCTTTCCTTTCTTTCCCCCCCCCCTTGGGGTTCCC
CCCCGGGAGACCACCCCTGGTTTTTAAACAAAAAATTGGTTTCTCCCCCC
CCCCCTCCATGGAACCCTCTGGGG

Query= MSMg01no368_g22.g1 MSMg01no368_g22.g1 CHROMAT_FILE:
MSMg01no368_g22.g1 PHD_FILE: MSMg01no368_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:52 2005
         (382 letters)



>mm_chr12_36616726_36617504
          Length = 779

 Score =  559 bits (289), Expect = e-163
 Identities = 361/416 (86%), Gaps = 51/416 (12%)
 Strand = Plus / Plus

                                                                       
Query: 1   catcaggtgccacagaagaaagtagatggaagcctgatacatggtagatctgcctgtcca 60
           ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 201 catcaggtgccacagaagaaagtagatggaagcctgatacatgatagatctgtctgtcca 260

                                                                       
Query: 61  tggtaccaggagacagagctctccctgctatgtaccagacccaggcaggctgctctttga 120
           ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 261 tggtaccaggagacagagctctccct---atgtaccagacccaggcaggctgctctttga 317

                                                                       
Query: 121 tctgagagaatttgcagcattttagtgctacatttaatgcaccaaagaatgctgttggga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tctgagagaatttgcagcattttagtgctacatttaatgcaccaaagaatgctgttggga 377

                                                                       
Query: 181 tatcacagaccccttagggcatgtgcaggctcacacacacacacacacacacacacacac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatcacagaccccttagggcatgtgcaggctcacacacacacacacacacacacacacac 437

                                                                       
Query: 241 acacacacacacacacacacacacacctgtctctctgtctctgtttctgtttctctctgt 300
           ||||||||||||              ||||||||||||||||||||||||||||||||||
Sbjct: 438 acacacacacac--------------ctgtctctctgtctctgtttctgtttctctctgt 483

                                                                       
Query: 301 gtttctctct----------------------------ctctctctctctctctctctct 332
           ||||||||||                            ||||||||||||||||||||||
Sbjct: 484 gtttctctctgtgtttctctctgtgtttctctctgtttctctctctctctctctctctct 543

                                                                   
Query: 333 ctctctctctc-c-----ctctctctctctggctggntctctctctctttctttct 382
           ||||||||||| |     ||||||||||||| |||| |||||||||||||||||||
Sbjct: 544 ctctctctctctctctctctctctctctctgcctggttctctctctctttctttct 599


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 107
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 779
Length adjustment: 9
Effective length of query: 373
Effective length of database: 770
Effective search space:   287210
Effective search space used:   287210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)