Query= MSMg01no370_e09.b1 MSMg01no370_e09.b1 CHROMAT_FILE:
MSMg01no370_e09.b1 PHD_FILE: MSMg01no370_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:16 2005
(417 letters)
>mm_chr12_11085932_11086751
Length = 820
Score = 727 bits (376), Expect = 0.0
Identities = 405/416 (97%), Gaps = 3/416 (0%)
Strand = Plus / Minus
Query: 5 gaattctctcacttcactaactcaagtgtcctctgtgggaaagctcccttcctcagaaaa 64
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 620 gaattctctcacttcactaactcaagtgtcctctgtggaaaagctcccttcctcagaaca 561
Query: 65 aagaacctcatggacttcctgaggaatggctgccacatgtgtctgtttctctagtttttc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagaacctcatggacttcctgaggaatggctgccacatgtgtctgtttctctagtttttc 501
Query: 125 tatcagcaatgacacagcagtcagactgctgagccaacaggtaaagccagatactaacct 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 500 tatcagcaatgacacagcagtcagactgctgagccaacagctaaagccagatactaacct 441
Query: 185 gccacagatctgtatccagaagggatccaagtggccctccaagagtggcatcctgagtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccacagatctgtatccagaagggatccaagtggccctccaagagtggcatcctgagtca 381
Query: 245 ---cagttcttggagaatacctctaccctctttgaccttcacaagaagagaagctgtccc 301
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 380 caccagttcttggagaatacctctaccctctttgaccttcacaagatgagaagctgtccc 321
Query: 302 ttttacactcagactgtgacaccactggtccagctggggagtcatagacagtcaggggta 361
|||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 320 ttttacactcaggctgtgacaccactggtccggctggggagtcataggcagtcaggggta 261
Query: 362 tgtgagatcacttttaccttcaagcctagtgcttatgcacatgcatagtgagtctg 417
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 260 tgtgagatcacttttaccttcaagcctagtggttatgcacatgcatagtgagtctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 820
Length adjustment: 9
Effective length of query: 408
Effective length of database: 811
Effective search space: 330888
Effective search space used: 330888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e09.g1 MSMg01no370_e09.g1 CHROMAT_FILE:
MSMg01no370_e09.g1 PHD_FILE: MSMg01no370_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:16 2005
(381 letters)
>mm_chr12_10882040_10882820
Length = 781
Score = 659 bits (341), Expect = 0.0
Identities = 371/381 (97%)
Strand = Plus / Plus
Query: 1 aatcagcaacatagaaaacagcaagaggaatcagaatagtccccacctcacacattcctc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aatcagcaacatagaaaacagcaagaagaatcagaatagtccccacctcacacattcctc 260
Query: 61 tgaaacaatgagatgcatagcagagatcctctctgcacggcaggaaccttctaaaactag 120
|| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tggaacaatgagatgcatagcggagatcccctctgcacggcaggaaccttctaaaactag 320
Query: 121 attattcattggaaacagatacttttgaaaaaaataagtttaagatgttgggaaaatatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 attattcattggaaacagatacttttgaaaaaaataagtttaagatgttgggaagatatc 380
Query: 181 agcttgtttaaaaggttataaaatgcttaaagtcattttcagatcttatctggttttgaa 240
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 agcttgcttaaaaggttataaaatgcttaaagtcattttcagaccttatctggttttgaa 440
Query: 241 ccaaaagttacttgaagaggtagggttctacactcaggtttatggcatccaagacaaaga 300
||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaaagttgctttaagaggtagtgttctacactcaggtttatggcatccaagacaaaga 500
Query: 301 cggctaccactcatgatcctttggaaacatataatcatttttcagatcatagagctcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggctaccactcatgatcctttggaaacatataatcatttttcagatcatagagctcaaa 560
Query: 361 gatggatagtgatcagcaaca 381
|||||||||||||||||||||
Sbjct: 561 gatggatagtgatcagcaaca 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
