TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTAGTGGTAGTTGGAGGAGATGTAAGTCTGAATTTTTCATAATGCAT
GCAGAAACGTCCATCATAGCTTTCTCTGCAGAAAATTTCCATTATAGCTT
TCTCAGACTGAATATTTATAGTCTGAAGATTGCTCCCCTAAAGTGGCATC
ACCTACATGTCTGCTTAATCCAGCTGCATACTGAAAACCTTGTTGCCTTG
TTTATCTACATGTAACAGTCTGCCTATTTATTAAGCTGTATGTATGCAAT
ACCCCAGTGTTTGGTTCATGAATTCATAATAATCATTTTGAGCTTCTAGG
ATCTTGTTGTTTCTCCTAAAGAGATTTCAGTCTATTGGACCTCAGATTCT
TTCTGGGTCCATGTTTCTGTGTGTCTGTCTTTCCATTTTTACCTCATTAC
CTGCTGCCCTAGTCCAGATCCATTCCTCCAGCTGCTCTAGAATTTAGCAA
CGGCCTTTAGAAAATCTTTGTTGCTGTTTTGCTGTTGCTCCCTTGTTTGT
CTCCCTCTGCCTCTATGTTTTTCCTCCTTATTCTCTCTTCCGTTTCCCCT
TCACCCTTTTTTTTCCGCTTTCTTATCTCTCTCACGCTTTTCTTCTCGCT
CTTTTCCATTTTTCCTTTATCTTTCCTTCCTCTGTTCTTTCTTCACCGCT
ATTCATATTTCCCCCTCCTTTATATCTTCCTCTCTTTCCTCATTATTTTC
CTTCCTATCCTTCCCAGTC

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTTCGTTATTCTGTTTTTTGTTTGTTTG
TTTGTTTGCTTGCTTTGCTTTGCTTTTGCTTTTCCAGACGAATTTGAGAA
TTGCTCTTTCTATATCTTTGAAGAATTGTGTTAGGATTTTAATGGAATTG
CATTGGATCTATAGATTGCATTTGGTTGGATGGCCATTTTTAATACATTA
ATTCTGCCAATCCATGAGCATGGGAGATTTCTCCAATTTCTGAGATCTTC
TTTGATTTCTTTCCTGAGAGACTTGAAATTATAGTCATATGGGTCTTCCA
CTTGTTTGGTTAGAGTTGCCCCAAGATATTTTATATTATTTTTGGCTATT
GTGAAGGGAGTTGCTTCCCTAATTTCTTCTGCAGCCTTTTGATCCAGTGT
ATAAAATAATGCTACTGACTTATTTGAGTTCCCTTTTTATCTGGCCACTC
TTGTTTAAGCTGTTTATTACTTGCATCAAGCTCCTTGTCACATTATTGCG
TTCACTTTTCGTCCCCTTTCCCCCCCTTTACATTCGCTCCCCCTTCCTTT
TCTCCCCTTCCCCTTTTTATTCCTCTCCCCACACTTATCCTCTTTTTTTT
CTTTTCCTTATTATTCTCTCTCCCTTCTTCCCTTCCTTTATTTTCCCTCT
TCTTCTCTTTCTCCATCTCGTTTTTCGCTCCCGCTTCTTAATCATTTAGC
GTCCTTCGCCTCCTN

Query= MSMg01no370_l02.b1 MSMg01no370_l02.b1 CHROMAT_FILE:
MSMg01no370_l02.b1 PHD_FILE: MSMg01no370_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:49 2005
         (477 letters)



>mm_chr12_63538214_63539090
          Length = 877

 Score =  857 bits (443), Expect = 0.0
 Identities = 466/475 (98%), Gaps = 4/475 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttagtggtagttggaggagatgtaagtctgaatttttcataatgcatgcagaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaattctttagtggtagttggaggagatgtaagtctgaatttttcataatgcatgcagaa 618

                                                                       
Query: 65  acgtccatcatagctttctctgcagaaaatttccattatagctttctcagactgaatatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 acgtccatcatagctttctctgcagaaaatttccattatagctttctcagactgaatatt 558

                                                                       
Query: 125 tatagtctgaagattgctcccctaaagtggcatcacctacatgtctgcttaatccagctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tatagtctgaagattgctcccctaaagtggcatcacctacatgtctgcttaatccagctg 498

                                                                       
Query: 185 catactgaaaaccttgttgccttgtttatctacatgtaacagtctgcctatttattaagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 catactgaaaaccttgttgccttgtttatctacatgtaacagtctgcctatttattaagc 438

                                                                       
Query: 245 tgtatgtatgcaataccccagtgtttggttcatgaattcataataatcattttgagcttc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgtatgtatgcaataccccagtgtttggttcatgaattcataataatcattttgagcttc 378

                                                                       
Query: 305 taggatcttgttgtttctcctaaagagatttcagtctattggacctcagattctttctgg 364
           ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taggatcctgttctttctcctaaagagatttcagtctattggacctcagattctttctgg 318

                                                                       
Query: 365 gtccatgtttctgtgtgtctgtctttccat--ttttacctcattacctgctgccctagtc 422
           |||||||||||||||||||||||||||  |  |||||||||||||||||||||||||| |
Sbjct: 317 gtccatgtttctgtgtgtctgtctttc--tggttttacctcattacctgctgccctaggc 260

                                                                  
Query: 423 cagatccattcctccagctgctctagaatttagcaacggcctttagaaaatcttt 477
           |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 259 cagatccattcctcaagctgctctagaatttagcaatggcctttagaaaatcttt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)