Query= MSMg01no372_e15.b1 MSMg01no372_e15.b1 CHROMAT_FILE:
MSMg01no372_e15.b1 PHD_FILE: MSMg01no372_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:00 2005
(505 letters)
>mm_chr12_93692216_93693125
Length = 910
Score = 870 bits (450), Expect = 0.0
Identities = 484/498 (97%), Gaps = 5/498 (1%)
Strand = Plus / Minus
Query: 1 catgcttcagaagttagacaagcatttattaatacctaccatggaggacaattcccacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 catgcttcagaagttagacaagcatttattaatacctaccatggaggacaattcccacaa 639
Query: 61 tatcttagaagatagcataatattgaattggaaagtctccactccggtggccaagggcat 120
|||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||
Sbjct: 638 tatcttagaagatagcataatactgagttggaaagtctccactccagtggccaagggcat 579
Query: 121 tgcattcacttgaaattttacacacacaatgttatgattgcttgcctctttccttcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgcattcacttgaaattttacacacacaatgttatgattgcttgcctctttccttcagct 519
Query: 181 tcttaagcctcagttttcttgtataaacaattatacttatgagacccttttgacaatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tcttaagcctcagttttcttgtataaacaattatacttatgagacccttttgacaatgtg 459
Query: 241 tttcagggattcagtaagatatcctgaaattcctgagatat-----gtatttaataaagg 295
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 458 tttcagggattcagtaaaatatcctgaaattcctgagatataatatgtatttaataaagg 399
Query: 296 tgtgtttctcctgaagacctagctatcagatgctagagatctaggtgataaatgtgccac 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgtgtttctcctgaagacctagctatcagatgctagagatctaggtgataaatgtgccac 339
Query: 356 actctcagaccaaggtcaataactgtaactcaaagctgtgactcaatggtaaactagcta 415
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 338 actctcagaccaaggtcaataactgtaactcaaagctgtgcctcaatggtaaactagcta 279
Query: 416 atggcatcactacattgcactctgccttcttggttttaccaagcaacacctattgttctc 475
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 278 atggcattgctacattgcactctggcttcttggttttaccaagcaacacctattgttctc 219
Query: 476 tgttctacactgcttctt 493
|||||||||||| |||||
Sbjct: 218 tgttctacactgtttctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 910
Length adjustment: 10
Effective length of query: 495
Effective length of database: 900
Effective search space: 445500
Effective search space used: 445500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_e15.g1 MSMg01no372_e15.g1 CHROMAT_FILE:
MSMg01no372_e15.g1 PHD_FILE: MSMg01no372_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:00 2005
(420 letters)
>mm_chr12_93528040_93528859
Length = 820
Score = 750 bits (388), Expect = 0.0
Identities = 412/420 (98%)
Strand = Plus / Plus
Query: 1 ttgattacattttttcacaagaaatcttcagagtactagacatataaaacaaacattttg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 ttgattacattttttcacaagaaatcttcagagtactggacatataaaacaaacattttg 260
Query: 61 ctttgttgatttaattacataatgaatgaagtataggagaaatgaatgcacagctcattg 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctttgttgatttaattacataatgaatgaagtataggagaaattaatgcacagctcattg 320
Query: 121 gattcatgaccattttaactcaagtataattcagtatgtcttaatatcattctatccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattcatgaccattttaactcaagtataattcagtatgtcttaatatcattctatccttg 380
Query: 181 gataaaatatcttagtttttccttgtgtttaaaaacttcagtaaaattactgttcctact 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 gataaaatatcttagtttttccttgtgtttaaaaacatcagtaaaattactgttcctact 440
Query: 241 ttttcccatgctatgaattcttctgctacatacttgaagtggccacattgtgaagaaaat 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 441 ttttcccatgctatgaattcttctgctacatacttgaagtggccacgttgtgaaggaaat 500
Query: 301 gttctagtatgctccatgtgccatctgtcttcctttaaccaatggcattgtagcagaatt 360
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 501 gttctattatgctccatgtgccatctgtctttctttaaccaatggcattgtagcaaaatt 560
Query: 361 ctaacaagtgcaggcacaaatgtgtttggttggctttcactggtcttcttggtcactagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaacaagtgcaggcacaaatgtgtttggttggctttcactggtcttcttggtcactagc 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
