XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATAG
GTACCAGCCTTCTTCTTCCATTCTCAGTTGAAGGAGGCTTATTAAAGGGT
ACTCCAACTTTACCTCTATTCATGCAAACCTCCACATCCCTCAGTCTTTC
TGCTTTCCTCAGACCCATCTTTAACAACAAAAGCACCAGAATAAGGCATA
GTGATAGTTAAACTAAGTGCTACCCTCACAATTGCAGCAAAGAGTGTTTT
TTGTTATTTCATTAAACTGTAAACACAAACTTCCATATGGCCTATGACAA
ATCCCATGGTCTGACTGCTAGGCTTTCTACCATTACTTCAATCTTAATCA
CTTTGCTAAAACCCATATGCCTTCCCTATATTGTCCATTATTACCAGATC
TTTCTACATTTTGAAACTTTACATTTGTCTCTTAGGATTCCTGAAAAATT
CACCTCAAATGTCGTTTCTTTAGAGACACAGTTGATTCTCTCCCCAGTGA
ATTTCTACCTCCAGTGGAATCACTTTTCCACACCACTTTCATTGTCTTCC
CAGTAGCTACCAACACTGAAGACAAATTAAGTGTTCATTCTTTCTTCTCA
CTAATATGTATCTCCCTGGGAACCATGGAAGCAGCCGTCATATAATAGGA
GCTCAGATGGCCTGGCTAGGTAAATCATGGATTGCCCAAAGCAGAGGCGG
CAGTGCCCCTTGGGCACTTAAATCCCAGAAGAACCCGGGCTTATATTGAA
A

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTGTTTAGACTATACCTCATTTTTTAATTGGGTTAT
TTGATTTGTTGATGTCTAGATTCTTGAATTCTTTATATATTTTAGATATC
AGCCCTCTGTCAGATGTTGGGCTGCTGAAGATGTCTTCCCATTCTGTGGG
ATGTCATTTGTCCTTTTAAAGTGTCCTTTGCCTTTCAGAAGCTTTTCAGT
TTCTTGAGGTCCATTTATTAATTGTTGATATTCTATTTTGAGGAATTATT
TGAAGAGTATTGATATTAATTCTTCTTTGTAAGTTTGACAGACTTCTGTG
CTCAAACCAAGTAGCCCTGGGATTTTTATTTTTATTTTTTGTCAGGAGGC
TTTTAATCACTGCTTCTATTTCTTTAGGGGTAATGTCTATTTAGATTGTT
TATCTGGTTGTTATTTGACTGGGTAAGTGAAATCCTTCCAAAAATTGTCC
ATTTTAAAATTTTTTATATTATGTGGAGTACCTGTTTTATAGTATAACCT
ACTGATTATTTGGATTTTCTCCCCGCTTATTATCCACGTTCCCTGCTCAT
TTCTGAATTTGTTAACTTGAATATTCTTCCTCTGGCTTCTTGGTTATTTT
TTTCACGAACCAGCTCCTTGTTTCTTTGAACCCTTTCATTGTACCCCCCG
TTTCCAACCTCCTGTTTTGCCTTTTGTCCCTGGTTTTTTTTTTTCGCTTT
TTCATTTTGCACTTT

Query= MSMg01no372_i20.b1 MSMg01no372_i20.b1 CHROMAT_FILE:
MSMg01no372_i20.b1 PHD_FILE: MSMg01no372_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:19 2005
         (517 letters)



>mm_chr12_44711303_44712219
          Length = 917

 Score =  984 bits (509), Expect = 0.0
 Identities = 515/517 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttcttcttccattctcagttgaaggaggcttattaaagggtactccaactttacctcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttcttccattctcagttgaaggaggcttattaaagggtactccaactttacctcta 260

                                                                       
Query: 61  ttcatgcaaacctccacatccctcagtctttctgctttcctcagacccatctttaacaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcatgcaaacctccacatccctcagtctttctgctttcctcagacccatctttaacaac 320

                                                                       
Query: 121 aaaagcaccagaataaggcatagtgatagttaaactaagtgctaccctcacaattgcagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagcaccagaataaggcatagtgatagttaaactaagtgctaccctcacaattgcagc 380

                                                                       
Query: 181 aaagagtgttttttgttatttcattaaactgtaaacacaaacttccatatggcctatgac 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagagtgttttttgttatttcatcaaactgtaaacacaaacttccatatggcctatgac 440

                                                                       
Query: 241 aaatcccatggtctgactgctaggctttctaccattacttcaatcttaatcactttgcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcccatggtctgactgctaggctttctaccattacttcaatcttaatcactttgcta 500

                                                                       
Query: 301 aaacccatatgccttccctatattgtccattattaccagatctttctacattttgaaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacccatatgccttccctatattgtccattattaccagatctttctacattttgaaact 560

                                                                       
Query: 361 ttacatttgtctcttaggattcctgaaaaattcacctcaaatgtcgtttctttagagaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacatttgtctcttaggattcctgaaaaattcacctcaaatgtcgtttctttagagaca 620

                                                                       
Query: 421 cagttgattctctccccagtgaatttctacctccagtggaatcacttttccacaccactt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagttgattctctccccagtgaatttctacctccagtggaatcacttttccacaccactt 680

                                                
Query: 481 tcattgtcttcccagtagctaccaacactgaagacaa 517
           ||||||||||||||||||||| |||||||||||||||
Sbjct: 681 tcattgtcttcccagtagctagcaacactgaagacaa 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)