Query= MSMg01no372_l09.b1 MSMg01no372_l09.b1 CHROMAT_FILE:
MSMg01no372_l09.b1 PHD_FILE: MSMg01no372_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:31 2005
(535 letters)
>mm_chr12_16795464_16796398
Length = 935
Score = 1035 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus
Query: 1 cagactggcttcaaactcatagagatctgcctgcttctgactccagagtgctgggattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagactggcttcaaactcatagagatctgcctgcttctgactccagagtgctgggattaa 260
Query: 61 ctgtaccatccatgttaaaaggctgttccacattagataccatttccttctcactctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtaccatccatgttaaaaggctgttccacattagataccatttccttctcactctggg 320
Query: 121 gggcatcttttctctgtgtccttactgtaagtattccacttcacacgttttgatagctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggcatcttttctctgtgtccttactgtaagtattccacttcacacgttttgatagctgc 380
Query: 181 agatatcaaatattctttgacataatttctttatattatgagatttgggctttgaagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatatcaaatattctttgacataatttctttatattatgagatttgggctttgaagaaa 440
Query: 241 tggaagttgtattgtggtcttctctgcttaatcaaatatttacattatatttatattata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaagttgtattgtggtcttctctgcttaatcaaatatttacattatatttatattata 500
Query: 301 gtgaatatatactgctaaatattataaatttacacctatcccttataggaactgttcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgaatatatactgctaaatattataaatttacacctatcccttataggaactgttcaaa 560
Query: 361 agtatcattgaggtaacagatggttatttattaggtaaaatggttacaatttctctgtgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtatcattgaggtaacagatggttatttattaggtaaaatggttacaatttctctgtgc 620
Query: 421 cctagtaaaaccctgtctcaagataaaacaaagcaacacaatagcaatggccatccagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctagtaaaaccctgtctcaagataaaacaaagcaacacaatagcaatggccatccagat 680
Query: 481 gattcagagggtaaaggcacttgctgcctatcctactgacgcttggacccacatg 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gattcagagggtaaaggcacttgctgcctatcctactgacgcttggacccacatg 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_l09.g1 MSMg01no372_l09.g1 CHROMAT_FILE:
MSMg01no372_l09.g1 PHD_FILE: MSMg01no372_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:31 2005
(202 letters)
>mm_chr12_17014324_17014927
Length = 604
Score = 360 bits (186), Expect = e-104
Identities = 199/204 (97%), Gaps = 2/204 (0%)
Strand = Plus / Minus
Query: 1 caggatagccagggctatgcagagtaaccctgtctcaaaaaaagcaaccaactaaccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 caggatagccagggctatgcagagtaaccctgtctcaaaaaaagcaaccaactaaccaag 388
Query: 61 taaagatctgttttccttttcttttttc--ttttttttttgggggggggagtatgtatat 118
|||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 387 taaagatctgttttccttttcttttttctttttttttttttggggggggagtatgtatat 328
Query: 119 tgtgcatttctgtgtgtatgtgcttgtatatacagttgtaggagagaaggggcattctgg 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 tgtgcatttctgtgtgtatgtgcttgtatatacagttgtaggagagaaggggcaagctgg 268
Query: 179 agagaccattttttataatatgga 202
||||||||||||||||||||||||
Sbjct: 267 agagaccattttttataatatgga 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 604
Length adjustment: 8
Effective length of query: 194
Effective length of database: 596
Effective search space: 115624
Effective search space used: 115624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
