Query= MSMg01no372_p01.b1 MSMg01no372_p01.b1 CHROMAT_FILE:
MSMg01no372_p01.b1 PHD_FILE: MSMg01no372_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:48 2005
(591 letters)
>mm_chr12_49173160_49174150
Length = 991
Score = 1112 bits (575), Expect = 0.0
Identities = 584/587 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccaaaattacagtattggaaagtatttgaggatttaacttcattgaatatttg 64
|||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcaccaaaataaaagtattggaaagtatttgaggatttaacgtcattgaatatttg 264
Query: 65 tacaatgatgtagtattttacgtacctttattaaatcaagttgatggtatcagaaagagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacaatgatgtagtattttacgtacctttattaaatcaagttgatggtatcagaaagagg 324
Query: 125 tatttttcaccaggaattgagaaaaaaatgttaaaagggacatacattaaattttaagat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttttcaccaggaattgagaaaaaaatgttaaaagggacatacattaaattttaagat 384
Query: 185 aatttagaacatagaaatgatttcagtaactttgaatatatgtgtctaagcacatgatac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatttagaacatagaaatgatttcagtaactttgaatatatgtgtctaagcacatgatac 444
Query: 245 acagacaaacaggatgatcaatggaatataattgaggacacagaaataaatccacacact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagacaaacaggatgatcaatggaatataattgaggacacagaaataaatccacacact 504
Query: 305 caaggacacttgatcttaaacaaagaagccaaaaacatacaatggataaataaaagtatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaggacacttgatcttaaacaaagaagccaaaaacatacaatggataaataaaagtatc 564
Query: 365 ttcaataaatagggctagttgaatcagcagtctgtatggagaaacataaaaaaattctgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaataaatagggctagttgaatcagcagtctgtatggagaaacataaaaaaattctgt 624
Query: 425 atccattcctctgttgagggacatctgggttctttccagcttctggctattataaataag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atccattcctctgttgagggacatctgggttctttccagcttctggctattataaataag 684
Query: 485 gctgctatgaacataatggagcatgtgtttgtattaccagttggaacattttctggctat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctgctatgaacataatggagcatgtgtttgtattaccagttggaacattttctggctat 744
Query: 545 atgcccagtagaggtattgctggatcttccacagtcatctttaggat 591
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atgcccagtagaggtattgctggatcttccacagtcatctttaggat 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p01.g1 MSMg01no372_p01.g1 CHROMAT_FILE:
MSMg01no372_p01.g1 PHD_FILE: MSMg01no372_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:48 2005
(599 letters)
>mm_chr12_49311292_49312291
Length = 1000
Score = 1131 bits (585), Expect = 0.0
Identities = 596/600 (99%), Gaps = 1/600 (0%)
Strand = Plus / Minus
Query: 1 ttcctaaataaagcctcataacttcttccagttgatctgtcaaagcctcctaagtaggaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 800 ttcctaaataaagcctcataacttctgccagttgatctgtcaaagcctcctaagtaggaa 741
Query: 61 aaacgcttttctttggataacttcacaataaagaatttttacacatatagaatttgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aaacgcttttctttggataacttcacaataaagaatttttacacatatagaatttgagtt 681
Query: 121 atattcataatcccattttttatatgaaaagcaaaataaaagcaaaagaaaactggaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atattcataatcccattttttatatgaaaagcaaaataaaagcaaaagaaaactggaaaa 621
Query: 181 ttaataattgttaattttatctgaaatggatgatattagaaaagaagtaataaaaaatta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctaataattgttaattttatctgaaatggatgatattagaaaagaagtaataaaaaatta 561
Query: 241 ataaaagttactatgaacaatttaacttaaggcaagaataatattctaaaatatttaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ataaaagttactatgaacaatttaacttaaggcaagaataatattctaaaatatttaaaa 501
Query: 301 ctattaatttcagaaaaaactaaaatttcccattaaggtttaccagtttcttctcttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctattaatttcagaaaaaactaaaatttcccattaaggtttaccagtttcttctcttcat 441
Query: 361 tgttctccttaccttgacaatggtttctcatactactttagcaatttgttgtgaatttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgttctccttaccttgacaatggtttctcatactactttagcaatttgttgtgaatttgc 381
Query: 421 cctgaaagttaaacactcatttaaaca-ttttttaattctaatagtagcataaaatattg 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 cctgaaagttaaacactcatttaaacatttttttaattctaatagtagcataaaatattg 321
Query: 480 aaagtatgaagcactttatttacttctgcttgagatacaaattatttattataaacatat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagtatgaagcactttatttacttctgcttgagatacaaattatttattataaacatat 261
Query: 540 aagcattctgtgattataaaatatacagagacnaattaatatattcaatcactttaactc 599
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 260 aagcattctgtgattataaaatatacagagacaaattaatatattcaatcactttaactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
