Query= MSMg01no373_c23.b1 MSMg01no373_c23.b1 CHROMAT_FILE:
MSMg01no373_c23.b1 PHD_FILE: MSMg01no373_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:06 2005
(466 letters)
>mm_chr12_5975582_5976447
Length = 866
Score = 880 bits (455), Expect = 0.0
Identities = 458/459 (99%)
Strand = Plus / Plus
Query: 8 gaattcatcctctgacagctagtgctgggcttctgaataggcactggatgagtgcagccc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcatcctctgacagctagtgctgggcttctgaataggcactggatgagtgcagccc 267
Query: 68 ttcctggagccttgtcccctgctaggcatctgccacaccatcatgctgctagtctttccc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttcctggagccttgtcccctgctaggcatctgccacaccatcatgctgctagtctttccc 327
Query: 128 acagtctccagggagccatgtaccaggtctgtgccacttcactgacttctgaaagctgtg 187
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 328 acagtctccagggagccatgtaccaggtctgtgccacttcactgactcctgaaagctgtg 387
Query: 188 tgcttccaccatagggagtgagataagtgtgtttatatcagctgccaagcttggaatgga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgcttccaccatagggagtgagataagtgtgtttatatcagctgccaagcttggaatgga 447
Query: 248 agttttctccttgtgggaatgcatcaatcacttctcaggactgaccttttgcagtagttc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agttttctccttgtgggaatgcatcaatcacttctcaggactgaccttttgcagtagttc 507
Query: 308 ctcttgtaaatgatgttttgcttttcctgattgcagaacaaaaatgagcttcataattaa 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctcttgtaaatgatgttttgcttttcctgattgcagaacaaaaatgagcttcataattaa 567
Query: 368 gcttgtggtagacaaggtggcagtggccctttgttttcccagttgtcttaactgtgttct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcttgtggtagacaaggtggcagtggccctttgttttcccagttgtcttaactgtgttct 627
Query: 428 gaagtatgagcagggacttggagctttgcaatgatgaca 466
|||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaagtatgagcagggacttggagctttgcaatgatgaca 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_c23.g1 MSMg01no373_c23.g1 CHROMAT_FILE:
MSMg01no373_c23.g1 PHD_FILE: MSMg01no373_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:06 2005
(464 letters)
>mm_chr12_6119100_6119963
Length = 864
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%)
Strand = Plus / Minus
Query: 1 tttagggaaatagaatttgagcatgtcattacacctttttagatcttcattgaattagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tttagggaaatagaatttgagcatgtcattacacctttttagatcttcattgaattagtg 399
Query: 61 gcaaggtagtacaaccgttgccatagagcgaagaatcttaatttataggtaaactaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcaaggtagtacaaccgttgccatagagcgaagaatcttaatttataggtaaactaatgt 339
Query: 121 tggctcttaaataccacctatgctattgctaaatgtgtttcttttcattgcgacataatg 180
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 338 tggctcttaaataccacctatgctatcgctaaatgtgtttcttttcattgtgacataatg 279
Query: 181 ggaaaatgtcatgttcactgctaactggtcttaagccaatgaatatgaaaacgacccact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ggaaaatgtcatgttcactgctaactggtcttaagccaatgaatatgaaaacgacccact 219
Query: 241 aagtcatgctaaatgacctttattaagtccggttctcccgtaacttagactaatgtcaaa 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 218 aagtcatgctaaatgacctttattaagtccggttctcccataacttagactaatgtcaaa 159
Query: 301 ctttctgtgtagccaagattgaccttgaacttctgatctccctgactcgagctcctgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ctttctgtgtagccaagattgaccttgaacttctgatctccctgactcgagctcctgagt 99
Query: 361 gctgggaatgcagccatgggaatatacaatgaaaagtttatgcagtgctggagatcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gctgggaatgcagccatgggaatatacaatgaaaagtttatgcagtgctggagatcaaac 39
Query: 421 ccaagggctcatgcatgctaagcaagcactctcccaaa 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ccaagggctcatgcatgctaagcaagcactctcccaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
