Query= MSMg01no373_m04.b1 MSMg01no373_m04.b1 CHROMAT_FILE:
MSMg01no373_m04.b1 PHD_FILE: MSMg01no373_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:47 2005
(476 letters)
>mm_chr12_77247836_77248711
Length = 876
Score = 487 bits (252), Expect = e-142
Identities = 296/316 (93%), Gaps = 11/316 (3%)
Strand = Plus / Minus
Query: 5 gaattcataaagattcccttgaatccacctacaaggcatattttcattgtaatacttaat 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaattcataaagaagcagttgaatccacctacaaggcatattttcattgtaatacttaat 252
Query: 65 aaagaaattataatatcacagccttacaccaacatgggctttttagtttttgttttttga 124
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 251 aaagaaattataatatcacagccttacagcaacatgggctttttagtttttgttttttga 192
Query: 125 gggatggtctcctgcactatttagttgaggctggcctggaacttgctatgtacctcaggt 184
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 191 gggatggtctcctgcactctttagttgaggctggcctggaacttactatgtacctcaggt 132
Query: 185 tggcctaggatttgtggcaattctctatgcttaggttccaggacaatgctggatttttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tggcctaggatttgtggcaattctctatgcttaggttccaggacaatgctggatttttaa 72
Query: 245 aaataggtattatattaatagaacagaatgccttttttt-----ctttgaacttt-ttta 298
|||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 71 aaataggtattatattaatagaacagaatgcc-----ttacaagctttgaactttgttta 17
Query: 299 ttagtgtgtgtgtgtg 314
|| |||||||| ||||
Sbjct: 16 tttgtgtgtgtatgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_m04.g1 MSMg01no373_m04.g1 CHROMAT_FILE:
MSMg01no373_m04.g1 PHD_FILE: MSMg01no373_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:47 2005
(133 letters)
>mm_chr12_77074489_77075021
Length = 533
Score = 226 bits (117), Expect = 3e-64
Identities = 129/133 (96%)
Strand = Plus / Plus
Query: 1 tccctggagtccgtgctgtccctccatctttccacggttccagggatcaaacccaggtgt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tccctggagtccgtgctgtccctccatctttccatggttccagggatcaaacccaggtgt 260
Query: 61 ctgggtttgcacagcaagcacccttacccgctaagccagcttgtcagcccccaaataatt 120
| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 261 ccgggtttgcacagcaagcacccttacccgctaagccagcttgtcagccctcagataatt 320
Query: 121 cttactaaagagg 133
|||||||||||||
Sbjct: 321 cttactaaagagg 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 533
Length adjustment: 8
Effective length of query: 125
Effective length of database: 525
Effective search space: 65625
Effective search space used: 65625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
