NTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCCCAAAATGCGCGGA
ATTCTTCAGTATTGCCCAGAGAGAAAGTTGTGGGAAAATAAAGGCTAGAA
AATAATGGGAGTGGTGAAGTCTGGTAGGCATTAAAATATTGAAAGCAAGA
GATAAGATCATTAGAGGTAGCCTTTATAACTGCTGTGAGAACCCAGGACT
TCCATAACCTACCAAATCTAAGCCCAAAGACCTTTGACCTTCTCTTTTCT
TTTAAATGCTTCCTTATGAATTGAATCTGCTTTCACAACTCACCAGCCAT
GACACAATTTCACAATAGATAATCTATCAGAATCTAATCTGAGTAGCAGT
AGCATACCTTCAGTCAAAACTTTGACTCAGGGGCTTGGGGACTCTTGAGT
TGGAAAGCACTTGCTGTACAAGTATGTGTGTTGGCATAAGGACCTCCCAA
ACCTTTGACATCACATACAATATGTCAAGACAATAGCTACCTTGTTCCCA
GAATACACTTGGCTCACCTCCCACCTATCCCTGTGTTCCATCATTTTTCA
TATAAATAAGGGGAACGCCCCTCCCCCTCTTTTTCTCTCCTCCCCCTCTT
CTCTTTCTGCTGCCACCTTGTCTCTCCCTCCCATAAAACCTCTTGGCCTA
ATGAGCTGTTGAGATGAGACCTGGCATTCTACACATCAATGTGGAGCTAA
TTTCAGCCCCGGATCTATGTTTAAAGAAGTTAACATGGGAATGCCGGGTT
ATGAACCACTACTGCTAGCCA

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTATGGTTATAACTTAGCCCTTA
TCACTTCTACATTTTTCCCTATAGGAGGTATGTGGCAAAGTTGGTTTTCC
TCAACATTAGGAGTGCTTATTACTGTGGGGACTAAATGATTATCACTGAG
ACTTATGTTTCTAAGAAATTGGTTGAGAAAGAGGGGGCAGGAGCCAAGTG
AGAAGCACAGATATGGTCCATGTGAGAAAAGAGGTGTTAGGCTCTTGGTC
TGTACTGAGCAGAATGGTGAGTGATGATTATAGGCTAAGGAGGAATGTAT
AGCTATGCACCCCATTGTGCTTCCTGCTGAGGAGAGACCATATGCTTAAG
AAACAAGTTGGTGGTCAGGCACTGTGGTAAGACGGAAATGACCACAGTCC
AGTTGCAGGAGACAGGAACAGGGGATGGGGCATGCTCTTAGTTAGGAGGT
GGACAAAACTCAGCTACCTATATTAATACCCATTGTCCTTGTATTCTGAG
CCCATCAGCCATGAAACTGGTCTCCCCCTTGACCCTCTATTAAAAGTGTC
ATTTTGGCTCGGGCCATTCGTGGCTTTATACATCCTCCCGATAATCTGCT
CTTTCGTCTGTTCTTTTTTGGGGCACCGTTATAAAGTACGTTCCTGTCTT
TTTTTCCCCGGCTCTGCTTCTCGTGATCCTATTTGTGCCATCTTTCCTTG
CCTTTTCATTTTCCTCCGTTTCCCTTTC

Query= MSMg01no374_l12.g1 MSMg01no374_l12.g1 CHROMAT_FILE:
MSMg01no374_l12.g1 PHD_FILE: MSMg01no374_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:03 2005
         (425 letters)



>mm_chr12_5790010_5790834
          Length = 825

 Score =  783 bits (405), Expect = 0.0
 Identities = 420/425 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttatggttataacttagcccttatcacttctacatttttccctataggaggtatgtggc 60
           ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tttatggttataacttagcccttgtcacttctacattttcccctataggaggtatgtggc 260

                                                                       
Query: 61  aaagttggttttcctcaacattaggagtgcttattactgtggggactaaatgattatcac 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 aaagttggttttcctcaacattaggagtgcttattactgtgggaactaaatgattatcac 320

                                                                       
Query: 121 tgagacttatgtttctaagaaattggttgagaaagagggggcaggagccaagtgagaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagacttatgtttctaagaaattggttgagaaagagggggcaggagccaagtgagaagc 380

                                                                       
Query: 181 acagatatggtccatgtgagaaaagaggtgttaggctcttggtctgtactgagcagaatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagatatggtccatgtgagaaaagaggtgttaggctcttggtctgtactgagcagaatg 440

                                                                       
Query: 241 gtgagtgatgattataggctaaggaggaatgtatagctatgcaccccattgtgcttcctg 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgagtgatgagtataggctaaggaggaatgtatagctatgcaccccattgtgcttcctg 500

                                                                       
Query: 301 ctgaggagagaccatatgcttaagaaacaagttggtggtcaggcactgtggtaagacgga 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ctgaggagagaccatatgcttaagaaacaagttggtggtcaggtactgtggtaagacgga 560

                                                                       
Query: 361 aatgaccacagtccagttgcaggagacaggaacaggggatggggcatgctcttagttagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgaccacagtccagttgcaggagacaggaacaggggatggggcatgctcttagttagg 620

                
Query: 421 aggtg 425
           |||||
Sbjct: 621 aggtg 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space:   339456
Effective search space used:   339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)