Query= MSMg01no376_b22.b1 MSMg01no376_b22.b1 CHROMAT_FILE:
MSMg01no376_b22.b1 PHD_FILE: MSMg01no376_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:56 2005
(457 letters)
>mm_chr12_5036268_5037121
Length = 854
Score = 837 bits (433), Expect = 0.0
Identities = 446/452 (98%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 5 gaattctcagtctacttgttaagtcgtggaatcccagagcaagaaaaacctgaactctac 64
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 653 gaattctcagtctacttgttaagtcatggaattccagagcaagaaaaacctgaactctac 594
Query: 65 ccaatctaggcctagttcaagtctttatatgtagcacactatacaaaggccagaagctca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccaatctaggcctagttcaagtctttatatgtagcacactatacaaaggccagaagctca 534
Query: 125 ctgaagcaagtatatttcttacttagtgttccatactagttaataagagagagtgggtag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctgaagcaagtatatttcttacttagtgttccatactagttaataagagagagtgggtag 474
Query: 185 gccccactccaaaacctagctgggcaacacacactagaatccatggtgaagagtgggtcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gccccactccaaaacctagctgggcaacacacactagaatccatggtgaagagtgggtcg 414
Query: 245 ggggcttggactcacagttgagtagtcagggagggaaagacaaaggagttgggtgagagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggggcttggactcacagttgagtagtcagggagggaaagacaaaggagttgggtgagagg 354
Query: 305 aggttaatatttccaaagtatgtatgaaattttcaagaaataaaaatatcattgagagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aggttaatatttccaaagtatgtatgaaattttcaagaaataaaaatatcattgagagaa 294
Query: 365 gagaacatattcttattctttgggaacaagaagatgttcttccttctatcacctctccta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gagaacatattcttattctttgggaacaagaagatgttcttccttctatcacctctccta 234
Query: 425 atagcagcattttagaanagtaagagaaacca 456
|| |||||||||||| ||||||||||||||
Sbjct: 233 at---agcattttagaaaagtaagagaaacca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 854
Length adjustment: 10
Effective length of query: 447
Effective length of database: 844
Effective search space: 377268
Effective search space used: 377268
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_b22.g1 MSMg01no376_b22.g1 CHROMAT_FILE:
MSMg01no376_b22.g1 PHD_FILE: MSMg01no376_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:56 2005
(406 letters)
>mm_chr12_4858356_4859161
Length = 806
Score = 754 bits (390), Expect = 0.0
Identities = 402/406 (99%)
Strand = Plus / Plus
Query: 1 acctcaaagggagaacttacaaaacgaaaaggaaacgtgcccactttccagagagctgga 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 acctcaaagggagaacttacaaaaagaaaaggaaacgtgcccactttccagagagctgga 260
Query: 61 aatcctctctcgacacctggttgcgatgcagcagtatctttctgaactcatgggttttct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 aatcctctctcgacacctggttgcgatgcagcagtatctttctgaactcacgggttttct 320
Query: 121 acacaaggagaagcgcatcgcccccgcgtatccaccctcgcaggatgctccatatgttca 180
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 acacaaggagaagcgcgtcgcccccgcatatccaccctcgcaggatgctccatatgttca 380
Query: 181 cctcatttaccaggtacagtctttcttgaggaacttccactatacaggaagctctggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcatttaccaggtacagtctttcttgaggaacttccactatacaggaagctctggaat 440
Query: 241 ccagtctgtcctgccagcaacgctgtggggacggtggggagggcgggagagtgaagccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccagtctgtcctgccagcaacgctgtggggacggtggggagggcgggagagtgaagccca 500
Query: 301 gtgacctgttagagcagtttggcattcctttgcacagttagatggatggtagcctaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgacctgttagagcagtttggcattcctttgcacagttagatggatggtagcctaccaa 560
Query: 361 aagttctcacacaggtttttgcctgactttatcatatccttggtgt 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagttctcacacaggtttttgcctgactttatcatatccttggtgt 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
