CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGTACAATACCGAATGGCAGAGAAGCACCTAAAAAAAATG
TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT
TCCACCTCACACCAGTCAGAATGACTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG
GGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA
GAAAATTGGACATAGTACTATCGGAGGATCCAGCAATACCTCTCCTGGGC
ATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTAT
GTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGAT
GCCTCTCAACAGCGGAATGGATACAGAAAATGTGGTACATCTACACAATG
GAGTACTACTCAGCTATTACAAAGAAAGAATTTATGAAATTCCTAGCCAA
ATGGATGGACCTGCAGGGCATCATCCCTGATGAGGTAAACATTCCCAAAG
GAAATTACCCACATGGACTCTCTGATAATTGGAAATACCCCCCCACCTTA
TGATTCCCCCAATTACAAACATTGCTTAAACCTTGTATCCCCCCACAATT
AACATTGTCCTTGGGCCTTTTTTCCCCCTCCTTAAACCGTCAATAAAACT
TTTCCCACGTGTCTTTTAATTAN

CATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACCAATGACTTGTAAGACAACTCAA
TAGGTAAGGTGTATGTCACCAAGCCAGACAACCTGAGTTCAAACCGCAAG
ACCTACATAATGGAAAAAGAATGGACTTGCCAAGATTGCCTCTGACCTCC
AAGTAAGTCCCACAATAAATACACACACACACACATACACCAATAAATAC
ACACACACACACAAAAAAAAAAACAAATAAAAATAATAATTCTCAACAAA
ACAATAACAAACTGAATTTTAAAAACTTAAAATATTATACCCAACAAAAT
GGAGTATATTCCAAGACTGATGGATTGATTTAGCATATTAAACCTAATCA
ATATAACTTAAATTAATGGAATATAGGGTAGTTTAATGTCACCATTTTAT
TAATTAATTCAATACACCTTTTTCATGACTTCTTCATGGTTAAAGATAGA
AAATTTAAAAACCTAGAAAAGAAATAAAGCTTTTCAACTTCTATGTAAAT
TTGTAAAAAGCCCATAATTAGTCATCTCAGATAAAAATAAAGAAAAACTG
AGATGTNGAAAGNAGGGCTTAACTGTAATCTTAATACTTGGGAAAAGAAC
CACAGAACCAAGGGTTCAAGGTCAGCTTTACTTCACTGGGGGGTTCTTTT
TGAAGGTTTAAATTCTTGAACCCCTTTCCTTTAAAAACCAAAATAATGGA
GATCTTAAAACCCCAAAAGGGTGGGN

Query= MSMg01no377_i17.g1 MSMg01no377_i17.g1 CHROMAT_FILE:
MSMg01no377_i17.g1 PHD_FILE: MSMg01no377_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:46 2005
         (480 letters)



>mm_chr12_48773550_48774430
          Length = 881

 Score =  874 bits (452), Expect = 0.0
 Identities = 475/484 (98%), Gaps = 4/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccaatgacttgtaagacaactcaataggtaaggtgtatgtcaccaagccagacaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 caccaatgacttgtaagacaactcaataggtaaggtgtatgtcaccaagccagacaacct 257

                                                                       
Query: 61  gagttcaaaccgcaagacctacataatggaaaaagaatggacttgccaagattgcctctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagttcaaaccgcaagacctacataatggaaaaagaatggacttgccaagattgcctctg 317

                                                                       
Query: 121 acctccaagtaagtcccacaataaatacacacacacacacatacaccaataaatacacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acctccaagtaagtcccacaataaatacacacacacacacatacaccaataaatacacac 377

                                                                       
Query: 181 acacacacaaaaaaa---aaaacaaataaaaataataattctcaacaaaacaataacaaa 237
           ||||||||| | | |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 acacacacacacacacacaaaacaaataaaaataataattctcaacaaaacaataacaaa 437

                                                                       
Query: 238 ctgaattttaaaaacttaaaatattatacccaacaaaatggagtatattccaagactgat 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctgaattttaaaaacttaaaatattatacccaacaaaatggagtatattccaagactgat 497

                                                                       
Query: 298 ggattgatttagcatattaaacctaatcaatataacttaaattaatggaatatagggtag 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggattgatttagcatattaaacctaatcaatataacttaaattaatggaatatagggtag 557

                                                                       
Query: 358 tttaatgtcaccattttattaattaattcaatacacctttttcatgacttcttcatggtt 417
           |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 558 tttaatgtcaccattttattaattaattcaatacacttttttcatgactccttcatggtt 617

                                                                       
Query: 418 aaagatagaaaatttaaaaacctagaaaagaaataaagcttttcaac-ttctatgtaaat 476
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 618 aaagatagaaaatttaaaaacctagaaaagaaataaagcttttcaaccttctatgtaaat 677

               
Query: 477 ttgt 480
           ||||
Sbjct: 678 ttgt 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 881
Length adjustment: 10
Effective length of query: 470
Effective length of database: 871
Effective search space:   409370
Effective search space used:   409370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)