Query= MSMg01no377_o14.b1 MSMg01no377_o14.b1 CHROMAT_FILE:
MSMg01no377_o14.b1 PHD_FILE: MSMg01no377_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:16 2005
(551 letters)
>mm_chr12_95992492_95993442
Length = 951
Score = 1025 bits (530), Expect = 0.0
Identities = 547/554 (98%), Gaps = 3/554 (0%)
Strand = Plus / Minus
Query: 1 aaaatccatagccatagttgatcaagttgtcagacttttaggaatctaagcatgacactg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 924 aaaatccatagccatagttgatcaagttgtcagacttttaggaatctaaacatgacactg 865
Query: 61 aaaatacttcatattatattgagcatttatataagtaattgcatgaccaaaataagaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 aaaatacttcatattatattgagcatttatataagtaattgcatgaccaaaataagaacc 805
Query: 121 ccccagaataaaccacactaaattaaatactaaaaaa---tattataaattttgatgtaa 177
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 ccccagaataaaccacactaaattaaatactaaaaaatattattataaattttgatgtaa 745
Query: 178 atcatccagaagggataattaacttgtatatagtacaaatataaccaaagtgctttattt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atcatccagaagggataattaacttgtatatagtacaaatataaccaaagtgctttattt 685
Query: 238 aattttgttcattattctgattaattaaaaaatagaacattataggtatgtcattatatg 297
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aattttgttcattattctgcttaattaaaaaatagaacattataggtatgtcattatatg 625
Query: 298 aactaataaaaaatagaaaaaacatctattgagaactagtataaaatagaaaaaaaaatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 624 aactaataaaaaatagaaaaaacatctattgagaactagtataaaatagaaaaaaaattt 565
Query: 358 attgagtaccttgtccatagtcaatatttacaattgagtaagactttgttataaaatctg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attgagtaccttgtccatagtcaatatttacaattgagtaagactttgttataaaatctg 505
Query: 418 aaccagaataaatctatcagaaaataaattggtataatatatacttaagactgaaatgct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaccagaataaatctatcagaaaataaattggtataatatatacttaagactgaaatgct 445
Query: 478 ctaaaaatggattagccaaagcaaatgcaatcttgagcatatagtatgacgtaaggaggg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctaaaaatggattagccaaagcaaatgcaatcttgagcatatagtatgacgtaaggaggg 385
Query: 538 agatctcggggttt 551
|| |||||||||||
Sbjct: 384 aggtctcggggttt 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_o14.g1 MSMg01no377_o14.g1 CHROMAT_FILE:
MSMg01no377_o14.g1 PHD_FILE: MSMg01no377_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:16 2005
(458 letters)
>mm_chr12_95832116_95832973
Length = 858
Score = 870 bits (450), Expect = 0.0
Identities = 456/458 (99%)
Strand = Plus / Plus
Query: 1 tagtccaaacagcaacaacagtgtcggctgccgaaaatgacattccgccagtcagagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtccaaacagcaacaacagtgtcggctgccgaaaatgacattccgccagtcagagatc 260
Query: 61 tttccgactttttcttattatcctatctgcttccatatcatttttactcagcgtgcactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccgactttttcttattatcctatctgcttccatatcatttttactcagcgtgcactg 320
Query: 121 actgcaggctaggcataatggatttccaattgagaaagtgcaacgttcagagctatcaga 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 actgcaggctaggcataatggatttccaattgggaaagtgcaacgttcagagctatcaga 380
Query: 181 agcaggtcggttcaggggtagagctgctggaaggtttcccttatcatcctctaatcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaggtcggttcaggggtagagctgctggaaggtttcccttatcatcctctaatcattg 440
Query: 241 aaatatcaacgagattgccttcaagtccaagtgacagactttctgtgtcgattcggagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatatcaacgagattgccttcaagtccaagtgacagactttctgtgtcgattcggagca 500
Query: 301 aagcgagctgaaactccatcagaaaagaaaataagggccattcacaggcagagagttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcgagctgaaactccatcagaaaagaaaataagggccattcacaggcagagagttcat 560
Query: 361 taccatgatatttttccatgatgtttctaaattgtctttgtggatggacctgaatgcata 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccatgatatttttccgtgatgtttctaaattgtctttgtggatggacctgaatgcata 620
Query: 421 agtgctttatgtccctctagacaactatagttattaca 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtgctttatgtccctctagacaactatagttattaca 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
