Query= MSMg01no377_o19.b1 MSMg01no377_o19.b1 CHROMAT_FILE:
MSMg01no377_o19.b1 PHD_FILE: MSMg01no377_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(503 letters)
>mm_chr12_9298579_9299481
Length = 903
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%)
Strand = Plus / Minus
Query: 5 gaattcacatcagatgacgttagctttatggaaatctaaaagacttcaaaaataatagtg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaattcacatcagacgaagttagctttatggaaatctaaaagacttcaaaaataatagtg 644
Query: 65 tttagaatattgagataaatgaagaaataacttttaaaaacattcaggtaataaaatgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 tttagaatattgagataaatgaagaaataacttttaaaaacattcaggtaataaaatgga 584
Query: 125 ggcagaaatagaaatatagagaaagggagaataaacaattatcaatggagatgaacttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ggcagaaatagaaatatagagaaagggagaataaacaattatcaatggagatgaacttca 524
Query: 185 gcttgtcaaagtaagataagcgtgctgggtcagaggtgagcagcctatgaccacatcctt 244
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gcttgtcaaagtaagataagcatgctgggtcagaggtgagcagcctatgaccacatcctt 464
Query: 245 tgcatgcccgaatttttgaatgctgggtatggaaggaagggaccacatgcatccctgtgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tgcatgcccgaatttttgaatgctgggtatggaaggaagggaccacatgcatccctgtgt 404
Query: 305 gggtagatggtggcccttcactggcaaccctgaatatattcagtaatatccaagtatact 364
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gggtagatggtggccctttactggcaaccctgaatatattcagtaatatccaagtatact 344
Query: 365 gaacttcctccaaatagcttgctttaatagtctgtgagtcactttggatgtctcattctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gaacttcctccaaatagcttgctttaatagtctgtgagtcactttggatgtctcattctt 284
Query: 425 agaatattctattactatctatgtctagaagagacaagaccaatagaagctaaggtttga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agaatattctattactatctatgtctagaagagacaagaccaatagaagctaaggtttga 224
Query: 485 tagccagtattctcaggga 503
|||||||||||||||||||
Sbjct: 223 tagccagtattctcaggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_o19.g1 MSMg01no377_o19.g1 CHROMAT_FILE:
MSMg01no377_o19.g1 PHD_FILE: MSMg01no377_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:17 2005
(300 letters)
>mm_chr12_9171884_9172583
Length = 700
Score = 565 bits (292), Expect = e-165
Identities = 298/300 (99%)
Strand = Plus / Plus
Query: 1 tgggctgctggctttaaattcatgctggagattacatgctggacattatagaatggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggctgctggctttaaattcatgctggagattacatgctggacattatagaatggttct 260
Query: 61 ggggtggaggtgggaggcattggggcttattgctgggacacatgtagtcactagttctaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggtggaggtgggaggcatcggggcttattgctgggacacatgtagtcactagttctaa 320
Query: 121 gagggatgttgggatatggctgtttccccatggttctgtggctttctgccattgaatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagggatgttgggatatggctgtttccccatggttctgtggctttctgccattgaatgac 380
Query: 181 tccaattttctcttcaagaacctcccccccctcattaatgtcctccatcagtgtgttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaattttctcttcaagaacctcccccccctcattaatgtcctccatcagtgtgttggg 440
Query: 241 tagcggcacttccctctggaccctggctgatgcccaaccattgtcctcgcagcgtcacac 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtggcacttccctctggaccctggctgatgcccaaccattgtcctcgcagcgtcacac 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
