Query= MSMg01no378_b20.b1 MSMg01no378_b20.b1 CHROMAT_FILE:
MSMg01no378_b20.b1 PHD_FILE: MSMg01no378_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:31 2005
(444 letters)
>mm_chr12_109231925_109232769
Length = 845
Score = 777 bits (402), Expect = 0.0
Identities = 427/440 (97%), Gaps = 9/440 (2%)
Strand = Plus / Minus
Query: 6 ggaattccctgaggtgcaggtgcaagatagttgttgatggaccagggcaggcagggtcct 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggaattccctgaggggcaggtgcaagatagttgttgatggaccagggcaggcagggtcct 512
Query: 66 aggatctgtgtgacagagggactttcaggctaggtaatgccctctgatggaggtttggtg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aggatctgtgtgacagagggactttcaggctaggtaatgccctctgatggaggtttggtg 452
Query: 126 gctgcttggctgagccagtgtgaacagctcctctccatttctgtcttctgtcccaaattc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gctgcttggctgagccagtgtgaacagctcctctccatttctgtcttctgtcccaaattc 392
Query: 186 cttcccagcggagctgagactggggaagtttgccttaggatcaagggttcctcttccact 245
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 391 cttcccagcggagctgagactggggaagtttgccttaggatcaagggatcctcttccact 332
Query: 246 tagcagtgatgcctattattatttgtgaagcctgatttcattgcctctaaatgcg-ttaa 304
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 331 taacagtgatgcctattattatttgtgaagcctgatttcattgcctctaaatgcgtttaa 272
Query: 305 ccagctgggaggaggcccagccttgtaaataaaatgtggttttgttgtaaaagaaaatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccagctgggaggaggcccagccttgtaaataaaatgtggttttgttgtaaaagaaaatct 212
Query: 365 aactcttctctctctctctccctccctctctctgtatttgtgtgtatgtatgtatgtata 424
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 211 aactcttctctctctctctctctccctctctctgtatttgtgtgtatgtatg-------- 160
Query: 425 tatatatatttgctcacgtg 444
||||||||||||||||||||
Sbjct: 159 tatatatatttgctcacgtg 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space: 362390
Effective search space used: 362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_b20.g1 MSMg01no378_b20.g1 CHROMAT_FILE:
MSMg01no378_b20.g1 PHD_FILE: MSMg01no378_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:31 2005
(374 letters)
>mm_chr12_109028112_109028885
Length = 774
Score = 700 bits (362), Expect = 0.0
Identities = 371/374 (99%)
Strand = Plus / Plus
Query: 1 tgtgccctgtacaacactggccacaaagagtatccgggatgtggccatccgggtagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tgtgccctgtacaacactggccacaaagagtatccgggatgtggctatccgggtagaaaa 260
Query: 61 gtgcctaagggtaagaaactcaaaggtaaggacaatattcatttctgtccctgggatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcctaagggtaagaaactcaaaggtaaggacaatattcatttctgtccctgggatata 320
Query: 121 gaagggttttgggtcgtgaaccctgggtatcttccttacctggaaagcactcagggttca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaggattttgggtcgtgaaccctgggtatcttccttacctggaaagcactcagggttca 380
Query: 181 ggtggctccgcccactcctgatcgccccacccctttcccacttcagaccaatggactgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtggctccgcccactcctgatcgccccacccctttcccacttcagaccaatggactgtt 440
Query: 241 ctcctttggagagaagatccgatattaacccagaggagtcttgaacttactttgcagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctttggagagaagatccgatattaacccagaggagtcttgaacttactttgcagcca 500
Query: 301 cagatgaccccgaactttttggctcctcccgcctacacctcccgagagattgaatcatag 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatgaccccaaactttttggctcctcccgcctacacctcccgagagattgaatcatag 560
Query: 361 gcgtgtaccaccgt 374
||||||||||||||
Sbjct: 561 gcgtgtaccaccgt 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
