TTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCCACACTACTCTTAGAGTGGCTTAACCATTTTGCAGTTTGGCCA
ATGGTGAGTAAGGCTTTTGATATTTGTAACCCTCCACTTATAATATTTAA
AATTTGGATTGTAGTGGTAATACAAATGTACAAAGAAGTCAAACATTAAA
TACTTTTTTTTTACTTAGAAATTCAATAGTCAAGAAGCAAAATAATTGTA
AATGTAACAGATTCATATAGAGGATTAAAAAATCTGGTATTCATTTTAAG
GGTTTTTCTAGTATCTCATATTTCAATAAAATTTGCTATATACAACAGCA
CAGATTAGCATGAAATTGTGAAATTATTCAATTCTCAAAACAGTATGTCT
AGTAGTTTCCAAATATACAAGAAGATTTCTCCAAATATGATATTATATGT
TGTAAATTAATGGGAATAAAAGAATCATCTGCCCAGAGGTAATGACAGTG
GCTAGCTCTAGGATACTTAGATAATCCTGTAGTGCAGTGGAGAGGTGGTT
AGCTCTGAGTTGCTGTGCACAGCTCTGATGAGAAAGAGTGGAAAGCATTC
ATTGGCACTGTCAGACAGGTCTTGTTTCTTTGATGTGGTTACCAGTAAAT
TGGTTCTTTTTCAAAGGTAAGCATTCATATTTTAGAGATCATTCTGAATA
CCTATATCCTATTATGGAAAGTATATTGGATGTAAACCTAGCATGCCCAT
TTATTAATTAATAAAAATTAATCTCN

CGATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTCCTCATTGTCTCTTGACCTCCAG
AGAGTTTATTTGGACTACTTCACATGATACTCACAGAGTCTGAGAGAAAG
AATGAGCTGAGAGCTGAGGAGTAGATGGACAACTGGCATACTATTGATCC
TTCCATATTTTTTGAACAAAACAATTTATAAGGTTAGCTCAGATGGAAAA
TGATACCATGCCTCTAAAAGAAAAGACAGTTCTACTGGGACTAGCCACCA
CATCTATGCATCTTGATTGTTTTTTGTTTTCTGTAATGGTCTCTGTCTTT
TGAAAAAAAAAAGTGTCTTCTGGATGAGTAGTTAGGAATTATCTGTGGGT
ATAAGGATAAATGTTTAGAATGCAGTTAGGGATTGTGCTGTTTCAGTAAA
GTAGCAGTTGTAGGCTTTTCTGACTTCACTAGGTCTAGATGGCTGGCTAT
GCTTCCAGTACCAGGCATCGTTTTCCTTAGTGTGAGGGTCTTAAGTCCAA
CTGAAGAGCTGTTGGTTACTGCTAATGCATGTGCTCTACTATTGCACCTT
TAGGGTTATAGCACCATGCAGTCTTTTCTGTGATTCACAGGCTTCACGCC
TGGTGCTTGTTGTCTTCCTTCGAAAGTTGCATGACACCCTCCTTTTTTAT
TTAAACTCGCTTTCTTGGAAAACGGCTCGTAAAAATTTCCTTTCAGAGGC
TTTTCTGTTCTGTGGTG

Query= MSMg01no378_g12.b1 MSMg01no378_g12.b1 CHROMAT_FILE:
MSMg01no378_g12.b1 PHD_FILE: MSMg01no378_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:53 2005
         (572 letters)



>mm_chr12_66800711_66801683
          Length = 973

 Score = 1077 bits (557), Expect = 0.0
 Identities = 566/569 (99%), Gaps = 1/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccacactactcttagagtggcttaaccattttgcagtttggccaatggtgagt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccacactactcttagagtggcttaaccattttgcagtttggccaatggtgagt 264

                                                                       
Query: 65  aaggcttttgatatttgtaaccctccacttataatatttaaaatttggattgtagtggta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggcttttgatatttgtaaccctccacttataatatttaaaatttggattgtagtggta 324

                                                                       
Query: 125 atacaaatgtacaaagaagtcaaacattaaatacttttttttt-acttagaaattcaata 183
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 atacaaatgtacaaagaagtcaaacattaaatacttttttttttacttagaaattcaata 384

                                                                       
Query: 184 gtcaagaagcaaaataattgtaaatgtaacagattcatatagaggattaaaaaatctggt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcaagaagcaaaataattgtaaatgtaacagattcatatagaggattaaaaaatctggt 444

                                                                       
Query: 244 attcattttaagggtttttctagtatctcatatttcaataaaatttgctatatacaacag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attcattttaagggtttttctagtatctcatatttcaataaaatttgctatatacaacag 504

                                                                       
Query: 304 cacagattagcatgaaattgtgaaattattcaattctcaaaacagtatgtctagtagttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacagattagcatgaaattgtgaaattattcaattctcaaaacagtatgtctagtagttt 564

                                                                       
Query: 364 ccaaatatacaagaagatttctccaaatatgatattatatgttgtaaattaatgggaata 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaaatatacaagaagatttctccaaatatgatattatatgttgtaaattaatgggaata 624

                                                                       
Query: 424 aaagaatcatctgcccagaggtaatgacagtggctagctctaggatacttagataatcct 483
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaagaatcatttgcccagaggtaatgacagtggctagctctaggatacttagataatcct 684

                                                                       
Query: 484 gtagtgcagtggagaggtggttagctctgagttgctgtgcacagctctgatgagaaagag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 685 gtagtgcagtggagaggtggttagctctgagttgctgtgcacagctctgatgacaaagag 744

                                        
Query: 544 tggaaagcattcattggcactgtcagaca 572
           |||||||||||||||||||||||||||||
Sbjct: 745 tggaaagcattcattggcactgtcagaca 773


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 973
Length adjustment: 10
Effective length of query: 562
Effective length of database: 963
Effective search space:   541206
Effective search space used:   541206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)